Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Ripk4Q9ERK0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.66■■□□□ 1.86
Ripk4Q9ERK0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.66■■□□□ 1.86
Ripk4Q9ERK0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.66■■□□□ 1.86
Ripk4Q9ERK0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ripk4Q9ERK0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ripk4Q9ERK0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ripk4Q9ERK0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Ripk4Q9ERK0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
Ripk4Q9ERK0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ripk4Q9ERK0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ripk4Q9ERK0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ripk4Q9ERK0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ripk4Q9ERK0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ripk4Q9ERK0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ripk4Q9ERK0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
Ripk4Q9ERK0 Rps24-207ENSMUST00000224568 714 ntBASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.61■■□□□ 1.85
Ripk4Q9ERK0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk4Q9ERK0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ripk4Q9ERK0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.59■■□□□ 1.85
Ripk4Q9ERK0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ripk4Q9ERK0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ripk4Q9ERK0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Ripk4Q9ERK0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.58■■□□□ 1.85
Ripk4Q9ERK0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Ripk4Q9ERK0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ripk4Q9ERK0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ripk4Q9ERK0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ripk4Q9ERK0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ripk4Q9ERK0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ripk4Q9ERK0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Ripk4Q9ERK0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ripk4Q9ERK0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ripk4Q9ERK0 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.56■■□□□ 1.84
Ripk4Q9ERK0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ripk4Q9ERK0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ripk4Q9ERK0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
Ripk4Q9ERK0 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.55■■□□□ 1.84
Ripk4Q9ERK0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Ripk4Q9ERK0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ripk4Q9ERK0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Ripk4Q9ERK0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ripk4Q9ERK0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ripk4Q9ERK0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ripk4Q9ERK0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ripk4Q9ERK0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.52■■□□□ 1.84
Ripk4Q9ERK0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ripk4Q9ERK0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ripk4Q9ERK0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ripk4Q9ERK0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ripk4Q9ERK0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ripk4Q9ERK0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ripk4Q9ERK0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ripk4Q9ERK0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ripk4Q9ERK0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ripk4Q9ERK0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ripk4Q9ERK0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ripk4Q9ERK0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ripk4Q9ERK0 Gm45102-201ENSMUST00000207427 857 ntBASIC26.48■■□□□ 1.83
Ripk4Q9ERK0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ripk4Q9ERK0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ripk4Q9ERK0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ripk4Q9ERK0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ripk4Q9ERK0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ripk4Q9ERK0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ripk4Q9ERK0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ripk4Q9ERK0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ripk4Q9ERK0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ripk4Q9ERK0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ripk4Q9ERK0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
Ripk4Q9ERK0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms