Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RtcAQ9D7H3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RtcAQ9D7H3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RtcAQ9D7H3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RtcAQ9D7H3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RtcAQ9D7H3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RtcAQ9D7H3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RtcAQ9D7H3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RtcAQ9D7H3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RtcAQ9D7H3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RtcAQ9D7H3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.42■■□□□ 1.02
RtcAQ9D7H3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RtcAQ9D7H3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RtcAQ9D7H3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RtcAQ9D7H3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RtcAQ9D7H3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RtcAQ9D7H3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RtcAQ9D7H3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RtcAQ9D7H3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.4■■□□□ 1.02
RtcAQ9D7H3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RtcAQ9D7H3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RtcAQ9D7H3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RtcAQ9D7H3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
RtcAQ9D7H3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RtcAQ9D7H3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RtcAQ9D7H3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.36■■□□□ 1.01
RtcAQ9D7H3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RtcAQ9D7H3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RtcAQ9D7H3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.35■■□□□ 1.01
RtcAQ9D7H3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RtcAQ9D7H3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RtcAQ9D7H3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.33■■□□□ 1.01
RtcAQ9D7H3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RtcAQ9D7H3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RtcAQ9D7H3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.33■■□□□ 1.01
RtcAQ9D7H3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RtcAQ9D7H3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.32■■□□□ 1
RtcAQ9D7H3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.32■■□□□ 1
RtcAQ9D7H3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RtcAQ9D7H3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RtcAQ9D7H3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RtcAQ9D7H3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RtcAQ9D7H3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.31■■□□□ 1
RtcAQ9D7H3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RtcAQ9D7H3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.31■■□□□ 1
RtcAQ9D7H3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RtcAQ9D7H3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.3■■□□□ 1
RtcAQ9D7H3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RtcAQ9D7H3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RtcAQ9D7H3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RtcAQ9D7H3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RtcAQ9D7H3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RtcAQ9D7H3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
RtcAQ9D7H3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.28■■□□□ 1
RtcAQ9D7H3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RtcAQ9D7H3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RtcAQ9D7H3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RtcAQ9D7H3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RtcAQ9D7H3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.27■■□□□ 1
RtcAQ9D7H3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.27■■□□□ 1
RtcAQ9D7H3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RtcAQ9D7H3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RtcAQ9D7H3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RtcAQ9D7H3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RtcAQ9D7H3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RtcAQ9D7H3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms