Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl55Q9CZ83 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl55Q9CZ83 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl55Q9CZ83 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl55Q9CZ83 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl55Q9CZ83 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl55Q9CZ83 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl55Q9CZ83 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Mir6538-201ENSMUST00000183713 110 ntBASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mrpl55Q9CZ83 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Gm4799-201ENSMUST00000095396 657 ntBASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mrpl55Q9CZ83 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mrpl55Q9CZ83 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
Mrpl55Q9CZ83 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Mrpl55Q9CZ83 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mrpl55Q9CZ83 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mrpl55Q9CZ83 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Mrpl55Q9CZ83 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl55Q9CZ83 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl55Q9CZ83 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl55Q9CZ83 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mrpl55Q9CZ83 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mrpl55Q9CZ83 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl55Q9CZ83 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl55Q9CZ83 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mrpl55Q9CZ83 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mrpl55Q9CZ83 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl55Q9CZ83 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl55Q9CZ83 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl55Q9CZ83 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 244.3 ms