Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chd1lQ9CXF7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.78■■□□□ 1.56
Chd1lQ9CXF7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
Chd1lQ9CXF7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Chd1lQ9CXF7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Chd1lQ9CXF7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Chd1lQ9CXF7 Nkain2-201ENSMUST00000092602 558 ntBASIC24.75■■□□□ 1.55
Chd1lQ9CXF7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chd1lQ9CXF7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chd1lQ9CXF7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chd1lQ9CXF7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chd1lQ9CXF7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Chd1lQ9CXF7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chd1lQ9CXF7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chd1lQ9CXF7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chd1lQ9CXF7 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.73■■□□□ 1.55
Chd1lQ9CXF7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.72■■□□□ 1.55
Chd1lQ9CXF7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Chd1lQ9CXF7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Chd1lQ9CXF7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Chd1lQ9CXF7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.71■■□□□ 1.55
Chd1lQ9CXF7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Chd1lQ9CXF7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Chd1lQ9CXF7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Chd1lQ9CXF7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Chd1lQ9CXF7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Chd1lQ9CXF7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Chd1lQ9CXF7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Chd1lQ9CXF7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
Chd1lQ9CXF7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.69■■□□□ 1.54
Chd1lQ9CXF7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Chd1lQ9CXF7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Chd1lQ9CXF7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Chd1lQ9CXF7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Chd1lQ9CXF7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chd1lQ9CXF7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Chd1lQ9CXF7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Chd1lQ9CXF7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chd1lQ9CXF7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chd1lQ9CXF7 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.67■■□□□ 1.54
Chd1lQ9CXF7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Chd1lQ9CXF7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chd1lQ9CXF7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chd1lQ9CXF7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chd1lQ9CXF7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Chd1lQ9CXF7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Chd1lQ9CXF7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Chd1lQ9CXF7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Chd1lQ9CXF7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Chd1lQ9CXF7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Chd1lQ9CXF7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Chd1lQ9CXF7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Chd1lQ9CXF7 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.64■■□□□ 1.53
Chd1lQ9CXF7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Chd1lQ9CXF7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.64■■□□□ 1.53
Chd1lQ9CXF7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Chd1lQ9CXF7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chd1lQ9CXF7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chd1lQ9CXF7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.62■■□□□ 1.53
Chd1lQ9CXF7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chd1lQ9CXF7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.62■■□□□ 1.53
Chd1lQ9CXF7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Chd1lQ9CXF7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Chd1lQ9CXF7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chd1lQ9CXF7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Chd1lQ9CXF7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Chd1lQ9CXF7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.59■■□□□ 1.53
Chd1lQ9CXF7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chd1lQ9CXF7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chd1lQ9CXF7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
Chd1lQ9CXF7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chd1lQ9CXF7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chd1lQ9CXF7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chd1lQ9CXF7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chd1lQ9CXF7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Chd1lQ9CXF7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chd1lQ9CXF7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
Chd1lQ9CXF7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chd1lQ9CXF7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chd1lQ9CXF7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms