Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CQM1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Q9CQM1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQM1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQM1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQM1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQM1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.2■□□□□ 0.98
Q9CQM1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.2■□□□□ 0.98
Q9CQM1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQM1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CQM1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.19■□□□□ 0.98
Q9CQM1 Gm45417-201ENSMUST00000209533 758 ntBASIC21.19■□□□□ 0.98
Q9CQM1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CQM1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Q9CQM1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Q9CQM1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Q9CQM1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CQM1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CQM1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.18■□□□□ 0.98
Q9CQM1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.18■□□□□ 0.98
Q9CQM1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CQM1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CQM1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CQM1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CQM1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CQM1 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.16■□□□□ 0.98
Q9CQM1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CQM1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CQM1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.16■□□□□ 0.98
Q9CQM1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Q9CQM1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.16■□□□□ 0.98
Q9CQM1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Q9CQM1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.15■□□□□ 0.98
Q9CQM1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CQM1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CQM1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Q9CQM1 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.14■□□□□ 0.97
Q9CQM1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.14■□□□□ 0.97
Q9CQM1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q9CQM1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q9CQM1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CQM1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CQM1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Q9CQM1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Q9CQM1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CQM1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CQM1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CQM1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CQM1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.11■□□□□ 0.97
Q9CQM1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CQM1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CQM1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Q9CQM1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q9CQM1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CQM1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.09■□□□□ 0.97
Q9CQM1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Q9CQM1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.09■□□□□ 0.97
Q9CQM1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CQM1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CQM1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.08■□□□□ 0.97
Q9CQM1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Q9CQM1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.08■□□□□ 0.97
Q9CQM1 Gm8495-201ENSMUST00000188740 694 ntBASIC21.08■□□□□ 0.97
Q9CQM1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.08■□□□□ 0.97
Q9CQM1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9CQM1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9CQM1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Q9CQM1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CQM1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CQM1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CQM1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Q9CQM1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CQM1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CQM1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.06■□□□□ 0.96
Q9CQM1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q9CQM1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q9CQM1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q9CQM1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q9CQM1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
Q9CQM1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CQM1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.03■□□□□ 0.96
Q9CQM1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Q9CQM1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q9CQM1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Q9CQM1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQM1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQM1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.01■□□□□ 0.95
Q9CQM1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.01■□□□□ 0.95
Q9CQM1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Q9CQM1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9CQM1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CQM1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CQM1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21■□□□□ 0.95
Q9CQM1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21■□□□□ 0.95
Q9CQM1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CQM1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Q9CQM1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Q9CQM1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CQM1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Q9CQM1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms