Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Mir6538-201ENSMUST00000183713 110 ntBASIC21.24■□□□□ 0.99
Trim16Q99PP9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim16Q99PP9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim16Q99PP9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim16Q99PP9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim16Q99PP9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim16Q99PP9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.21■□□□□ 0.99
Trim16Q99PP9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim16Q99PP9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Trim16Q99PP9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim16Q99PP9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim16Q99PP9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim16Q99PP9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim16Q99PP9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim16Q99PP9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim16Q99PP9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim16Q99PP9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim16Q99PP9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim16Q99PP9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim16Q99PP9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim16Q99PP9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim16Q99PP9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim16Q99PP9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim16Q99PP9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim16Q99PP9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim16Q99PP9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim16Q99PP9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim16Q99PP9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.15■□□□□ 0.98
Trim16Q99PP9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim16Q99PP9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.15■□□□□ 0.98
Trim16Q99PP9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim16Q99PP9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim16Q99PP9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim16Q99PP9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim16Q99PP9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim16Q99PP9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim16Q99PP9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim16Q99PP9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim16Q99PP9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim16Q99PP9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim16Q99PP9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim16Q99PP9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim16Q99PP9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim16Q99PP9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim16Q99PP9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim16Q99PP9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim16Q99PP9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim16Q99PP9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Trim16Q99PP9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim16Q99PP9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim16Q99PP9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms