Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf111Q99ML9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf111Q99ML9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Rnf111Q99ML9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf111Q99ML9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf111Q99ML9 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.23■□□□□ 0.99
Rnf111Q99ML9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf111Q99ML9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.22■□□□□ 0.99
Rnf111Q99ML9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rnf111Q99ML9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf111Q99ML9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Rnf111Q99ML9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf111Q99ML9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf111Q99ML9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf111Q99ML9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf111Q99ML9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Rnf111Q99ML9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rnf111Q99ML9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf111Q99ML9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rnf111Q99ML9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rnf111Q99ML9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf111Q99ML9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf111Q99ML9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf111Q99ML9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.19■□□□□ 0.98
Rnf111Q99ML9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rnf111Q99ML9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rnf111Q99ML9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf111Q99ML9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.18■□□□□ 0.98
Rnf111Q99ML9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf111Q99ML9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.16■□□□□ 0.98
Rnf111Q99ML9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.16■□□□□ 0.98
Rnf111Q99ML9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf111Q99ML9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf111Q99ML9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf111Q99ML9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf111Q99ML9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf111Q99ML9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.14■□□□□ 0.98
Rnf111Q99ML9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Rnf111Q99ML9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.14■□□□□ 0.97
Rnf111Q99ML9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf111Q99ML9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf111Q99ML9 Terc-201ENSMUST00000082862 423 ntBASIC21.12■□□□□ 0.97
Rnf111Q99ML9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf111Q99ML9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf111Q99ML9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf111Q99ML9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rnf111Q99ML9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf111Q99ML9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.08■□□□□ 0.97
Rnf111Q99ML9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf111Q99ML9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf111Q99ML9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf111Q99ML9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf111Q99ML9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rnf111Q99ML9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.07■□□□□ 0.96
Rnf111Q99ML9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms