Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm44428-201ENSMUST00000204474 874 ntBASIC21.3■■□□□ 1
Pcdha8Q91Y12 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha8Q91Y12 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.29■■□□□ 1
Pcdha8Q91Y12 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha8Q91Y12 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha8Q91Y12 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcdha8Q91Y12 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha8Q91Y12 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdha8Q91Y12 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha8Q91Y12 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha8Q91Y12 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha8Q91Y12 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.27■■□□□ 1
Pcdha8Q91Y12 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha8Q91Y12 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha8Q91Y12 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Pcdha8Q91Y12 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha8Q91Y12 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha8Q91Y12 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdha8Q91Y12 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Pcdha8Q91Y12 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdha8Q91Y12 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdha8Q91Y12 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha8Q91Y12 Gm11175-201ENSMUST00000116172 543 ntBASIC21.22■□□□□ 0.99
Pcdha8Q91Y12 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdha8Q91Y12 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdha8Q91Y12 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdha8Q91Y12 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdha8Q91Y12 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha8Q91Y12 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdha8Q91Y12 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.21■□□□□ 0.99
Pcdha8Q91Y12 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.21■□□□□ 0.99
Pcdha8Q91Y12 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdha8Q91Y12 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdha8Q91Y12 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha8Q91Y12 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdha8Q91Y12 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdha8Q91Y12 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha8Q91Y12 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.17■□□□□ 0.98
Pcdha8Q91Y12 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdha8Q91Y12 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha8Q91Y12 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.14■□□□□ 0.98
Pcdha8Q91Y12 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.14■□□□□ 0.97
Pcdha8Q91Y12 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.14■□□□□ 0.97
Pcdha8Q91Y12 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha8Q91Y12 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha8Q91Y12 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha8Q91Y12 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha8Q91Y12 Mir6538-201ENSMUST00000183713 110 ntBASIC21.13■□□□□ 0.97
Pcdha8Q91Y12 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdha8Q91Y12 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms