Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.77■■□□□ 1.08
Pcdhb3Q91XZ7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb3Q91XZ7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb3Q91XZ7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhb3Q91XZ7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Iqck-206ENSMUST00000208658 2891 ntBASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb3Q91XZ7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb3Q91XZ7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhb3Q91XZ7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb3Q91XZ7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb3Q91XZ7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb3Q91XZ7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb3Q91XZ7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb3Q91XZ7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb3Q91XZ7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb3Q91XZ7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb3Q91XZ7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb3Q91XZ7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb3Q91XZ7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb3Q91XZ7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb3Q91XZ7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb3Q91XZ7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb3Q91XZ7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb3Q91XZ7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb3Q91XZ7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb3Q91XZ7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb3Q91XZ7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb3Q91XZ7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb3Q91XZ7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb3Q91XZ7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb3Q91XZ7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb3Q91XZ7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhb3Q91XZ7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb3Q91XZ7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb3Q91XZ7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb3Q91XZ7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb3Q91XZ7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb3Q91XZ7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb3Q91XZ7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb3Q91XZ7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb3Q91XZ7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb3Q91XZ7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Pcdhb3Q91XZ7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb3Q91XZ7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb3Q91XZ7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb3Q91XZ7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb3Q91XZ7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb3Q91XZ7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb3Q91XZ7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb3Q91XZ7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb3Q91XZ7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms