Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vsx1Q91V10 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.81■■□□□ 1.08
Vsx1Q91V10 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vsx1Q91V10 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vsx1Q91V10 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.8■■□□□ 1.08
Vsx1Q91V10 Gm21956-201ENSMUST00000179946 522 ntBASIC21.8■■□□□ 1.08
Vsx1Q91V10 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.8■■□□□ 1.08
Vsx1Q91V10 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vsx1Q91V10 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.79■■□□□ 1.08
Vsx1Q91V10 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vsx1Q91V10 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vsx1Q91V10 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vsx1Q91V10 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Vsx1Q91V10 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vsx1Q91V10 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vsx1Q91V10 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vsx1Q91V10 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vsx1Q91V10 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.77■■□□□ 1.08
Vsx1Q91V10 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Vsx1Q91V10 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vsx1Q91V10 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vsx1Q91V10 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vsx1Q91V10 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vsx1Q91V10 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vsx1Q91V10 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Vsx1Q91V10 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.75■■□□□ 1.07
Vsx1Q91V10 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.75■■□□□ 1.07
Vsx1Q91V10 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vsx1Q91V10 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vsx1Q91V10 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.74■■□□□ 1.07
Vsx1Q91V10 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.74■■□□□ 1.07
Vsx1Q91V10 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vsx1Q91V10 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vsx1Q91V10 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vsx1Q91V10 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Vsx1Q91V10 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vsx1Q91V10 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vsx1Q91V10 Gm7417-201ENSMUST00000192950 473 ntBASIC21.73■■□□□ 1.07
Vsx1Q91V10 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vsx1Q91V10 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vsx1Q91V10 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vsx1Q91V10 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vsx1Q91V10 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vsx1Q91V10 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vsx1Q91V10 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vsx1Q91V10 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Gm9847-201ENSMUST00000052528 599 ntBASIC21.7■■□□□ 1.06
Vsx1Q91V10 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vsx1Q91V10 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vsx1Q91V10 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vsx1Q91V10 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vsx1Q91V10 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vsx1Q91V10 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vsx1Q91V10 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vsx1Q91V10 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Vsx1Q91V10 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.67■■□□□ 1.06
Vsx1Q91V10 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.67■■□□□ 1.06
Vsx1Q91V10 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vsx1Q91V10 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vsx1Q91V10 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.67■■□□□ 1.06
Vsx1Q91V10 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vsx1Q91V10 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vsx1Q91V10 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vsx1Q91V10 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.66■■□□□ 1.06
Vsx1Q91V10 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vsx1Q91V10 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vsx1Q91V10 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vsx1Q91V10 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vsx1Q91V10 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vsx1Q91V10 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Vsx1Q91V10 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Vsx1Q91V10 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vsx1Q91V10 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vsx1Q91V10 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vsx1Q91V10 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vsx1Q91V10 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vsx1Q91V10 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
Vsx1Q91V10 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.64■■□□□ 1.05
Vsx1Q91V10 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vsx1Q91V10 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms