Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Gm22567-201ENSMUST00000175542 342 ntBASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm1Q8VC85 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm1Q8VC85 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm1Q8VC85 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Lsm1Q8VC85 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm1Q8VC85 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.02■□□□□ 0.96
Lsm1Q8VC85 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Lsm1Q8VC85 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.02■□□□□ 0.95
Lsm1Q8VC85 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.01■□□□□ 0.95
Lsm1Q8VC85 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.01■□□□□ 0.95
Lsm1Q8VC85 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm1Q8VC85 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm1Q8VC85 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm1Q8VC85 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm1Q8VC85 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21■□□□□ 0.95
Lsm1Q8VC85 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm1Q8VC85 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm1Q8VC85 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lsm1Q8VC85 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.99■□□□□ 0.95
Lsm1Q8VC85 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm1Q8VC85 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.99■□□□□ 0.95
Lsm1Q8VC85 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm1Q8VC85 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm1Q8VC85 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm1Q8VC85 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm1Q8VC85 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm1Q8VC85 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm1Q8VC85 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm1Q8VC85 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm1Q8VC85 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm1Q8VC85 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.95■□□□□ 0.94
Lsm1Q8VC85 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.95■□□□□ 0.94
Lsm1Q8VC85 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.95■□□□□ 0.94
Lsm1Q8VC85 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm1Q8VC85 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.94■□□□□ 0.94
Lsm1Q8VC85 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm1Q8VC85 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm1Q8VC85 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm1Q8VC85 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.92■□□□□ 0.94
Lsm1Q8VC85 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.91■□□□□ 0.94
Lsm1Q8VC85 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.91■□□□□ 0.94
Lsm1Q8VC85 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm1Q8VC85 Gm6311-201ENSMUST00000073790 878 ntBASIC20.91■□□□□ 0.94
Lsm1Q8VC85 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lsm1Q8VC85 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm1Q8VC85 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lsm1Q8VC85 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lsm1Q8VC85 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm1Q8VC85 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms