Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rpp40Q8R1F9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp40Q8R1F9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp40Q8R1F9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp40Q8R1F9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp40Q8R1F9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rpp40Q8R1F9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpp40Q8R1F9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpp40Q8R1F9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rpp40Q8R1F9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rpp40Q8R1F9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.64■■□□□ 1.37
Rpp40Q8R1F9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Rpp40Q8R1F9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.62■■□□□ 1.37
Rpp40Q8R1F9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpp40Q8R1F9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpp40Q8R1F9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
Rpp40Q8R1F9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.62■■□□□ 1.37
Rpp40Q8R1F9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpp40Q8R1F9 Gm5921-201ENSMUST00000075898 882 ntBASIC23.61■■□□□ 1.37
Rpp40Q8R1F9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpp40Q8R1F9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rpp40Q8R1F9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp40Q8R1F9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpp40Q8R1F9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.59■■□□□ 1.37
Rpp40Q8R1F9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.59■■□□□ 1.37
Rpp40Q8R1F9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.59■■□□□ 1.37
Rpp40Q8R1F9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rpp40Q8R1F9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpp40Q8R1F9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rpp40Q8R1F9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Rpp40Q8R1F9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpp40Q8R1F9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rpp40Q8R1F9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.57■■□□□ 1.36
Rpp40Q8R1F9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rpp40Q8R1F9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpp40Q8R1F9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rpp40Q8R1F9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.56■■□□□ 1.36
Rpp40Q8R1F9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rpp40Q8R1F9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Rpp40Q8R1F9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.55■■□□□ 1.36
Rpp40Q8R1F9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rpp40Q8R1F9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Rpp40Q8R1F9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpp40Q8R1F9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Rpp40Q8R1F9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rpp40Q8R1F9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Rpp40Q8R1F9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rpp40Q8R1F9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpp40Q8R1F9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpp40Q8R1F9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.53■■□□□ 1.36
Rpp40Q8R1F9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpp40Q8R1F9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Rpp40Q8R1F9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rpp40Q8R1F9 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.52■■□□□ 1.36
Rpp40Q8R1F9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rpp40Q8R1F9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpp40Q8R1F9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.51■■□□□ 1.35
Rpp40Q8R1F9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rpp40Q8R1F9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpp40Q8R1F9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Rpp40Q8R1F9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp40Q8R1F9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp40Q8R1F9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Rpp40Q8R1F9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpp40Q8R1F9 Gm13238-201ENSMUST00000117655 780 ntBASIC23.48■■□□□ 1.35
Rpp40Q8R1F9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.48■■□□□ 1.35
Rpp40Q8R1F9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.48■■□□□ 1.35
Rpp40Q8R1F9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpp40Q8R1F9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Rpp40Q8R1F9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms