Protein–RNA interactions for Protein: Q8CEE7

Rdh13, Retinol dehydrogenase 13, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh13Q8CEE7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh13Q8CEE7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh13Q8CEE7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh13Q8CEE7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh13Q8CEE7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Rdh13Q8CEE7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rdh13Q8CEE7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rdh13Q8CEE7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.27■□□□□ 0.99
Rdh13Q8CEE7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.26■□□□□ 0.99
Rdh13Q8CEE7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh13Q8CEE7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rdh13Q8CEE7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.26■□□□□ 0.99
Rdh13Q8CEE7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh13Q8CEE7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh13Q8CEE7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
Rdh13Q8CEE7 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.25■□□□□ 0.99
Rdh13Q8CEE7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh13Q8CEE7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh13Q8CEE7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh13Q8CEE7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh13Q8CEE7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh13Q8CEE7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rdh13Q8CEE7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.23■□□□□ 0.99
Rdh13Q8CEE7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.23■□□□□ 0.99
Rdh13Q8CEE7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh13Q8CEE7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh13Q8CEE7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh13Q8CEE7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh13Q8CEE7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh13Q8CEE7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh13Q8CEE7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh13Q8CEE7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rdh13Q8CEE7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh13Q8CEE7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh13Q8CEE7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rdh13Q8CEE7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.2■□□□□ 0.98
Rdh13Q8CEE7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh13Q8CEE7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rdh13Q8CEE7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.19■□□□□ 0.98
Rdh13Q8CEE7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Rdh13Q8CEE7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh13Q8CEE7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh13Q8CEE7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh13Q8CEE7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh13Q8CEE7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.17■□□□□ 0.98
Rdh13Q8CEE7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh13Q8CEE7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rdh13Q8CEE7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rdh13Q8CEE7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh13Q8CEE7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rdh13Q8CEE7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.16■□□□□ 0.98
Rdh13Q8CEE7 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.16■□□□□ 0.98
Rdh13Q8CEE7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rdh13Q8CEE7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rdh13Q8CEE7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh13Q8CEE7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh13Q8CEE7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh13Q8CEE7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rdh13Q8CEE7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh13Q8CEE7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rdh13Q8CEE7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rdh13Q8CEE7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rdh13Q8CEE7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rdh13Q8CEE7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh13Q8CEE7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh13Q8CEE7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms