Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf170Q8CBG9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rnf170Q8CBG9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf170Q8CBG9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf170Q8CBG9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf170Q8CBG9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf170Q8CBG9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf170Q8CBG9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Gm45364-201ENSMUST00000210883 159 ntBASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf170Q8CBG9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf170Q8CBG9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf170Q8CBG9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf170Q8CBG9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf170Q8CBG9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rnf170Q8CBG9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf170Q8CBG9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.43■□□□□ 0.54
Rnf170Q8CBG9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf170Q8CBG9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Gm6311-201ENSMUST00000073790 878 ntBASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf170Q8CBG9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf170Q8CBG9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Rnf170Q8CBG9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf170Q8CBG9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf170Q8CBG9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf170Q8CBG9 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf170Q8CBG9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf170Q8CBG9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf170Q8CBG9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf170Q8CBG9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Terc-201ENSMUST00000082862 423 ntBASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf170Q8CBG9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf170Q8CBG9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.36■□□□□ 0.53
Rnf170Q8CBG9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf170Q8CBG9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf170Q8CBG9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf170Q8CBG9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf170Q8CBG9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf170Q8CBG9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf170Q8CBG9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf170Q8CBG9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf170Q8CBG9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf170Q8CBG9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.33■□□□□ 0.53
Rnf170Q8CBG9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf170Q8CBG9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms