Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shisa4Q8CA71 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shisa4Q8CA71 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shisa4Q8CA71 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shisa4Q8CA71 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shisa4Q8CA71 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Shisa4Q8CA71 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shisa4Q8CA71 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shisa4Q8CA71 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Shisa4Q8CA71 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Shisa4Q8CA71 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Shisa4Q8CA71 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Shisa4Q8CA71 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Shisa4Q8CA71 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
Shisa4Q8CA71 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.88■■□□□ 1.73
Shisa4Q8CA71 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shisa4Q8CA71 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Shisa4Q8CA71 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Shisa4Q8CA71 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.87■■□□□ 1.73
Shisa4Q8CA71 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shisa4Q8CA71 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shisa4Q8CA71 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Shisa4Q8CA71 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Shisa4Q8CA71 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shisa4Q8CA71 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shisa4Q8CA71 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shisa4Q8CA71 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Shisa4Q8CA71 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.86■■□□□ 1.73
Shisa4Q8CA71 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.85■■□□□ 1.73
Shisa4Q8CA71 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shisa4Q8CA71 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shisa4Q8CA71 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Shisa4Q8CA71 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Shisa4Q8CA71 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
Shisa4Q8CA71 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
Shisa4Q8CA71 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Shisa4Q8CA71 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Shisa4Q8CA71 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Shisa4Q8CA71 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Shisa4Q8CA71 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.81■■□□□ 1.72
Shisa4Q8CA71 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.81■■□□□ 1.72
Shisa4Q8CA71 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Shisa4Q8CA71 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Shisa4Q8CA71 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Shisa4Q8CA71 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.79■■□□□ 1.72
Shisa4Q8CA71 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Shisa4Q8CA71 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Shisa4Q8CA71 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Shisa4Q8CA71 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Shisa4Q8CA71 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Shisa4Q8CA71 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Shisa4Q8CA71 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Shisa4Q8CA71 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 Gm5812-201ENSMUST00000061073 957 ntBASIC25.77■■□□□ 1.72
Shisa4Q8CA71 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Shisa4Q8CA71 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shisa4Q8CA71 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shisa4Q8CA71 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Shisa4Q8CA71 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Shisa4Q8CA71 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.74■■□□□ 1.71
Shisa4Q8CA71 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.74■■□□□ 1.71
Shisa4Q8CA71 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shisa4Q8CA71 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shisa4Q8CA71 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Shisa4Q8CA71 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shisa4Q8CA71 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.72■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms