Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap54Q8C6S9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap54Q8C6S9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.54■■□□□ 1.04
Cfap54Q8C6S9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cfap54Q8C6S9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap54Q8C6S9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap54Q8C6S9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cfap54Q8C6S9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cfap54Q8C6S9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cfap54Q8C6S9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cfap54Q8C6S9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cfap54Q8C6S9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cfap54Q8C6S9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cfap54Q8C6S9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cfap54Q8C6S9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cfap54Q8C6S9 Gm9847-201ENSMUST00000052528 599 ntBASIC21.51■■□□□ 1.03
Cfap54Q8C6S9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cfap54Q8C6S9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cfap54Q8C6S9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cfap54Q8C6S9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cfap54Q8C6S9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cfap54Q8C6S9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cfap54Q8C6S9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Gm12922-201ENSMUST00000120626 809 ntBASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cfap54Q8C6S9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Cfap54Q8C6S9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.47■■□□□ 1.03
Cfap54Q8C6S9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cfap54Q8C6S9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cfap54Q8C6S9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.46■■□□□ 1.03
Cfap54Q8C6S9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cfap54Q8C6S9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cfap54Q8C6S9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.46■■□□□ 1.03
Cfap54Q8C6S9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cfap54Q8C6S9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cfap54Q8C6S9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.45■■□□□ 1.02
Cfap54Q8C6S9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cfap54Q8C6S9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cfap54Q8C6S9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cfap54Q8C6S9 Gm7417-201ENSMUST00000192950 473 ntBASIC21.43■■□□□ 1.02
Cfap54Q8C6S9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cfap54Q8C6S9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cfap54Q8C6S9 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.42■■□□□ 1.02
Cfap54Q8C6S9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cfap54Q8C6S9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.42■■□□□ 1.02
Cfap54Q8C6S9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cfap54Q8C6S9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cfap54Q8C6S9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cfap54Q8C6S9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cfap54Q8C6S9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cfap54Q8C6S9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cfap54Q8C6S9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cfap54Q8C6S9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.4■■□□□ 1.02
Cfap54Q8C6S9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.4■■□□□ 1.02
Cfap54Q8C6S9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cfap54Q8C6S9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.4■■□□□ 1.02
Cfap54Q8C6S9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.4■■□□□ 1.02
Cfap54Q8C6S9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cfap54Q8C6S9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.39■■□□□ 1.02
Cfap54Q8C6S9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.39■■□□□ 1.01
Cfap54Q8C6S9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.39■■□□□ 1.01
Cfap54Q8C6S9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cfap54Q8C6S9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cfap54Q8C6S9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.38■■□□□ 1.01
Cfap54Q8C6S9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cfap54Q8C6S9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cfap54Q8C6S9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Cfap54Q8C6S9 Gm22238-201ENSMUST00000175222 88 ntBASIC21.38■■□□□ 1.01
Cfap54Q8C6S9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cfap54Q8C6S9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cfap54Q8C6S9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms