Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tsen54Q8C2A2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tsen54Q8C2A2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tsen54Q8C2A2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tsen54Q8C2A2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.23■□□□□ 0.51
Tsen54Q8C2A2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tsen54Q8C2A2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tsen54Q8C2A2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tsen54Q8C2A2 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.22■□□□□ 0.51
Tsen54Q8C2A2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tsen54Q8C2A2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tsen54Q8C2A2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tsen54Q8C2A2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tsen54Q8C2A2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tsen54Q8C2A2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tsen54Q8C2A2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Tsen54Q8C2A2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tsen54Q8C2A2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tsen54Q8C2A2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tsen54Q8C2A2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tsen54Q8C2A2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.18■□□□□ 0.5
Tsen54Q8C2A2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tsen54Q8C2A2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Tsen54Q8C2A2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tsen54Q8C2A2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.17■□□□□ 0.5
Tsen54Q8C2A2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.16■□□□□ 0.5
Tsen54Q8C2A2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Tsen54Q8C2A2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tsen54Q8C2A2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.15■□□□□ 0.5
Tsen54Q8C2A2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tsen54Q8C2A2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tsen54Q8C2A2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tsen54Q8C2A2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tsen54Q8C2A2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Tsen54Q8C2A2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tsen54Q8C2A2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tsen54Q8C2A2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tsen54Q8C2A2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tsen54Q8C2A2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tsen54Q8C2A2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tsen54Q8C2A2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tsen54Q8C2A2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tsen54Q8C2A2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tsen54Q8C2A2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.13■□□□□ 0.49
Tsen54Q8C2A2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen54Q8C2A2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen54Q8C2A2 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.11■□□□□ 0.49
Tsen54Q8C2A2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen54Q8C2A2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tsen54Q8C2A2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tsen54Q8C2A2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen54Q8C2A2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen54Q8C2A2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen54Q8C2A2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen54Q8C2A2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms