Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ska3Q8C263 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ska3Q8C263 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ska3Q8C263 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ska3Q8C263 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ska3Q8C263 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ska3Q8C263 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska3Q8C263 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska3Q8C263 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ska3Q8C263 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ska3Q8C263 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.57■□□□□ 0.88
Ska3Q8C263 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ska3Q8C263 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ska3Q8C263 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ska3Q8C263 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ska3Q8C263 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ska3Q8C263 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ska3Q8C263 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ska3Q8C263 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ska3Q8C263 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ska3Q8C263 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ska3Q8C263 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ska3Q8C263 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ska3Q8C263 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ska3Q8C263 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ska3Q8C263 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Ska3Q8C263 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ska3Q8C263 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ska3Q8C263 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.54■□□□□ 0.88
Ska3Q8C263 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ska3Q8C263 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.53■□□□□ 0.88
Ska3Q8C263 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.53■□□□□ 0.88
Ska3Q8C263 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ska3Q8C263 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ska3Q8C263 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.52■□□□□ 0.88
Ska3Q8C263 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ska3Q8C263 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ska3Q8C263 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Ska3Q8C263 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.51■□□□□ 0.87
Ska3Q8C263 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ska3Q8C263 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.51■□□□□ 0.87
Ska3Q8C263 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ska3Q8C263 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ska3Q8C263 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.5■□□□□ 0.87
Ska3Q8C263 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ska3Q8C263 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ska3Q8C263 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ska3Q8C263 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ska3Q8C263 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ska3Q8C263 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ska3Q8C263 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ska3Q8C263 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ska3Q8C263 Gm10420-201ENSMUST00000121713 882 ntBASIC20.49■□□□□ 0.87
Ska3Q8C263 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Ska3Q8C263 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ska3Q8C263 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ska3Q8C263 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ska3Q8C263 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.48■□□□□ 0.87
Ska3Q8C263 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ska3Q8C263 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ska3Q8C263 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ska3Q8C263 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ska3Q8C263 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ska3Q8C263 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ska3Q8C263 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ska3Q8C263 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ska3Q8C263 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ska3Q8C263 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ska3Q8C263 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.47■□□□□ 0.87
Ska3Q8C263 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.47■□□□□ 0.87
Ska3Q8C263 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ska3Q8C263 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.47■□□□□ 0.87
Ska3Q8C263 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ska3Q8C263 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ska3Q8C263 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ska3Q8C263 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ska3Q8C263 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ska3Q8C263 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ska3Q8C263 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ska3Q8C263 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.45■□□□□ 0.86
Ska3Q8C263 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ska3Q8C263 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ska3Q8C263 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ska3Q8C263 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ska3Q8C263 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms