Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp4r4Q8C0Y0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp4r4Q8C0Y0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.99■■□□□ 1.11
Ppp4r4Q8C0Y0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.99■■□□□ 1.11
Ppp4r4Q8C0Y0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp4r4Q8C0Y0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp4r4Q8C0Y0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.98■■□□□ 1.11
Ppp4r4Q8C0Y0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ppp4r4Q8C0Y0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ppp4r4Q8C0Y0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.98■■□□□ 1.11
Ppp4r4Q8C0Y0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Ppp4r4Q8C0Y0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Ppp4r4Q8C0Y0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ppp4r4Q8C0Y0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ppp4r4Q8C0Y0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Ppp4r4Q8C0Y0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ppp4r4Q8C0Y0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.95■■□□□ 1.1
Ppp4r4Q8C0Y0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.95■■□□□ 1.1
Ppp4r4Q8C0Y0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp4r4Q8C0Y0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp4r4Q8C0Y0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp4r4Q8C0Y0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp4r4Q8C0Y0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ppp4r4Q8C0Y0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ppp4r4Q8C0Y0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Ppp4r4Q8C0Y0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.94■■□□□ 1.1
Ppp4r4Q8C0Y0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Ppp4r4Q8C0Y0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp4r4Q8C0Y0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp4r4Q8C0Y0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp4r4Q8C0Y0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp4r4Q8C0Y0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp4r4Q8C0Y0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp4r4Q8C0Y0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp4r4Q8C0Y0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ppp4r4Q8C0Y0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ppp4r4Q8C0Y0 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.91■■□□□ 1.1
Ppp4r4Q8C0Y0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ppp4r4Q8C0Y0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ppp4r4Q8C0Y0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp4r4Q8C0Y0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ppp4r4Q8C0Y0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ppp4r4Q8C0Y0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp4r4Q8C0Y0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp4r4Q8C0Y0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.88■■□□□ 1.09
Ppp4r4Q8C0Y0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp4r4Q8C0Y0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp4r4Q8C0Y0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ppp4r4Q8C0Y0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ppp4r4Q8C0Y0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp4r4Q8C0Y0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ppp4r4Q8C0Y0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ppp4r4Q8C0Y0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ppp4r4Q8C0Y0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ppp4r4Q8C0Y0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ppp4r4Q8C0Y0 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.84■■□□□ 1.09
Ppp4r4Q8C0Y0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ppp4r4Q8C0Y0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ppp4r4Q8C0Y0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms