Protein–RNA interactions for Protein: Q8BYK6

Ythdf3, YTH domain-containing family protein 3, mousemouse

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf3Q8BYK6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ythdf3Q8BYK6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ythdf3Q8BYK6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ythdf3Q8BYK6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ythdf3Q8BYK6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ythdf3Q8BYK6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ythdf3Q8BYK6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ythdf3Q8BYK6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ythdf3Q8BYK6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.92■■□□□ 1.1
Ythdf3Q8BYK6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ythdf3Q8BYK6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ythdf3Q8BYK6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ythdf3Q8BYK6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ythdf3Q8BYK6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ythdf3Q8BYK6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ythdf3Q8BYK6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ythdf3Q8BYK6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.9■■□□□ 1.1
Ythdf3Q8BYK6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ythdf3Q8BYK6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ythdf3Q8BYK6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ythdf3Q8BYK6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ythdf3Q8BYK6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ythdf3Q8BYK6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ythdf3Q8BYK6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ythdf3Q8BYK6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.88■■□□□ 1.09
Ythdf3Q8BYK6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.88■■□□□ 1.09
Ythdf3Q8BYK6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.88■■□□□ 1.09
Ythdf3Q8BYK6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ythdf3Q8BYK6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ythdf3Q8BYK6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ythdf3Q8BYK6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ythdf3Q8BYK6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ythdf3Q8BYK6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ythdf3Q8BYK6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf3Q8BYK6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf3Q8BYK6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ythdf3Q8BYK6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Gm30023-201ENSMUST00000197970 889 ntBASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ythdf3Q8BYK6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ythdf3Q8BYK6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
Ythdf3Q8BYK6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ythdf3Q8BYK6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ythdf3Q8BYK6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ythdf3Q8BYK6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ythdf3Q8BYK6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Ythdf3Q8BYK6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ythdf3Q8BYK6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ythdf3Q8BYK6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ythdf3Q8BYK6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Gm9397-201ENSMUST00000200125 605 ntBASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ythdf3Q8BYK6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Iqck-206ENSMUST00000208658 2891 ntBASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ythdf3Q8BYK6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ythdf3Q8BYK6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ythdf3Q8BYK6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ythdf3Q8BYK6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ythdf3Q8BYK6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ythdf3Q8BYK6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ythdf3Q8BYK6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ythdf3Q8BYK6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ythdf3Q8BYK6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ythdf3Q8BYK6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms