Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Cpsf4Q8BQZ5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf4Q8BQZ5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf4Q8BQZ5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf4Q8BQZ5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf4Q8BQZ5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.08■□□□□ 0.97
Cpsf4Q8BQZ5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Gm14523-201ENSMUST00000117260 558 ntBASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf4Q8BQZ5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf4Q8BQZ5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Cpsf4Q8BQZ5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms