Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ckap4Q8BMK4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap4Q8BMK4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap4Q8BMK4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ckap4Q8BMK4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap4Q8BMK4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Ckap4Q8BMK4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap4Q8BMK4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap4Q8BMK4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap4Q8BMK4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap4Q8BMK4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.61■□□□□ 0.89
Ckap4Q8BMK4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.61■□□□□ 0.89
Ckap4Q8BMK4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap4Q8BMK4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap4Q8BMK4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.6■□□□□ 0.89
Ckap4Q8BMK4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.6■□□□□ 0.89
Ckap4Q8BMK4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap4Q8BMK4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.59■□□□□ 0.89
Ckap4Q8BMK4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap4Q8BMK4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap4Q8BMK4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap4Q8BMK4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap4Q8BMK4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap4Q8BMK4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap4Q8BMK4 Gm9812-201ENSMUST00000061934 968 ntBASIC20.58■□□□□ 0.89
Ckap4Q8BMK4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap4Q8BMK4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.58■□□□□ 0.88
Ckap4Q8BMK4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ckap4Q8BMK4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap4Q8BMK4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ckap4Q8BMK4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Gm6311-201ENSMUST00000073790 878 ntBASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap4Q8BMK4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap4Q8BMK4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ckap4Q8BMK4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ckap4Q8BMK4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ckap4Q8BMK4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ckap4Q8BMK4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.52■□□□□ 0.88
Ckap4Q8BMK4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ckap4Q8BMK4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.52■□□□□ 0.87
Ckap4Q8BMK4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ckap4Q8BMK4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap4Q8BMK4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ckap4Q8BMK4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap4Q8BMK4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap4Q8BMK4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap4Q8BMK4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ckap4Q8BMK4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.49■□□□□ 0.87
Ckap4Q8BMK4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ckap4Q8BMK4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.48■□□□□ 0.87
Ckap4Q8BMK4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms