Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tspan18Q80WR1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan18Q80WR1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan18Q80WR1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan18Q80WR1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan18Q80WR1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan18Q80WR1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.59■■□□□ 1.37
Tspan18Q80WR1 Gm22567-201ENSMUST00000175542 342 ntBASIC23.58■■□□□ 1.37
Tspan18Q80WR1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tspan18Q80WR1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
Tspan18Q80WR1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tspan18Q80WR1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tspan18Q80WR1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tspan18Q80WR1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.57■■□□□ 1.36
Tspan18Q80WR1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tspan18Q80WR1 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.57■■□□□ 1.36
Tspan18Q80WR1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan18Q80WR1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tspan18Q80WR1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tspan18Q80WR1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tspan18Q80WR1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tspan18Q80WR1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.54■■□□□ 1.36
Tspan18Q80WR1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Tspan18Q80WR1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Tspan18Q80WR1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.53■■□□□ 1.36
Tspan18Q80WR1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tspan18Q80WR1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.53■■□□□ 1.36
Tspan18Q80WR1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tspan18Q80WR1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.52■■□□□ 1.36
Tspan18Q80WR1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Tspan18Q80WR1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tspan18Q80WR1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tspan18Q80WR1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tspan18Q80WR1 Gm13238-201ENSMUST00000117655 780 ntBASIC23.51■■□□□ 1.35
Tspan18Q80WR1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Tspan18Q80WR1 Gm5812-201ENSMUST00000061073 957 ntBASIC23.51■■□□□ 1.35
Tspan18Q80WR1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tspan18Q80WR1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Tspan18Q80WR1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tspan18Q80WR1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Tspan18Q80WR1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tspan18Q80WR1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan18Q80WR1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan18Q80WR1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Tspan18Q80WR1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan18Q80WR1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan18Q80WR1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan18Q80WR1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tspan18Q80WR1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tspan18Q80WR1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Tspan18Q80WR1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tspan18Q80WR1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tspan18Q80WR1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tspan18Q80WR1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tspan18Q80WR1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Tspan18Q80WR1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.46■■□□□ 1.35
Tspan18Q80WR1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.46■■□□□ 1.35
Tspan18Q80WR1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Tspan18Q80WR1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tspan18Q80WR1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan18Q80WR1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Tspan18Q80WR1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan18Q80WR1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan18Q80WR1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan18Q80WR1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tspan18Q80WR1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.44■■□□□ 1.34
Tspan18Q80WR1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.44■■□□□ 1.34
Tspan18Q80WR1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Tspan18Q80WR1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Tspan18Q80WR1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Tspan18Q80WR1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Tspan18Q80WR1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Tspan18Q80WR1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.43■■□□□ 1.34
Tspan18Q80WR1 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.43■■□□□ 1.34
Tspan18Q80WR1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tspan18Q80WR1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Tspan18Q80WR1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Tspan18Q80WR1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tspan18Q80WR1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Tspan18Q80WR1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Tspan18Q80WR1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Tspan18Q80WR1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Tspan18Q80WR1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.41■■□□□ 1.34
Tspan18Q80WR1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tspan18Q80WR1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
Tspan18Q80WR1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tspan18Q80WR1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.4■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms