Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cspg5Q71M36 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cspg5Q71M36 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cspg5Q71M36 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cspg5Q71M36 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cspg5Q71M36 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cspg5Q71M36 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cspg5Q71M36 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cspg5Q71M36 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.53■■□□□ 1.2
Cspg5Q71M36 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.53■■□□□ 1.2
Cspg5Q71M36 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cspg5Q71M36 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cspg5Q71M36 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cspg5Q71M36 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cspg5Q71M36 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cspg5Q71M36 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cspg5Q71M36 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Cspg5Q71M36 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.52■■□□□ 1.2
Cspg5Q71M36 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.52■■□□□ 1.19
Cspg5Q71M36 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cspg5Q71M36 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.51■■□□□ 1.19
Cspg5Q71M36 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.51■■□□□ 1.19
Cspg5Q71M36 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cspg5Q71M36 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cspg5Q71M36 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cspg5Q71M36 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cspg5Q71M36 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cspg5Q71M36 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.5■■□□□ 1.19
Cspg5Q71M36 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.5■■□□□ 1.19
Cspg5Q71M36 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cspg5Q71M36 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cspg5Q71M36 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cspg5Q71M36 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.49■■□□□ 1.19
Cspg5Q71M36 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cspg5Q71M36 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cspg5Q71M36 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cspg5Q71M36 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.49■■□□□ 1.19
Cspg5Q71M36 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cspg5Q71M36 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.48■■□□□ 1.19
Cspg5Q71M36 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.48■■□□□ 1.19
Cspg5Q71M36 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cspg5Q71M36 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cspg5Q71M36 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cspg5Q71M36 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cspg5Q71M36 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cspg5Q71M36 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cspg5Q71M36 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.47■■□□□ 1.19
Cspg5Q71M36 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cspg5Q71M36 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cspg5Q71M36 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Cspg5Q71M36 Etf1-202ENSMUST00000180351 108 ntBASIC22.46■■□□□ 1.19
Cspg5Q71M36 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cspg5Q71M36 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cspg5Q71M36 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cspg5Q71M36 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cspg5Q71M36 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cspg5Q71M36 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cspg5Q71M36 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cspg5Q71M36 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cspg5Q71M36 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cspg5Q71M36 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Cspg5Q71M36 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.43■■□□□ 1.18
Cspg5Q71M36 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.43■■□□□ 1.18
Cspg5Q71M36 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cspg5Q71M36 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.42■■□□□ 1.18
Cspg5Q71M36 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cspg5Q71M36 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.41■■□□□ 1.18
Cspg5Q71M36 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cspg5Q71M36 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cspg5Q71M36 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cspg5Q71M36 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cspg5Q71M36 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Cspg5Q71M36 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cspg5Q71M36 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Cspg5Q71M36 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cspg5Q71M36 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cspg5Q71M36 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.4■■□□□ 1.18
Cspg5Q71M36 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cspg5Q71M36 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cspg5Q71M36 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cspg5Q71M36 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cspg5Q71M36 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Cspg5Q71M36 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms