Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.57■■□□□ 1.84
Npc1l1Q6T3U4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Npc1l1Q6T3U4 Gm43566-201ENSMUST00000196851 808 ntBASIC26.57■■□□□ 1.84
Npc1l1Q6T3U4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Npc1l1Q6T3U4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Npc1l1Q6T3U4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Npc1l1Q6T3U4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Npc1l1Q6T3U4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Npc1l1Q6T3U4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Npc1l1Q6T3U4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Npc1l1Q6T3U4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Npc1l1Q6T3U4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Npc1l1Q6T3U4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Npc1l1Q6T3U4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Npc1l1Q6T3U4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Npc1l1Q6T3U4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Npc1l1Q6T3U4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Npc1l1Q6T3U4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Npc1l1Q6T3U4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.52■■□□□ 1.84
Npc1l1Q6T3U4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.52■■□□□ 1.84
Npc1l1Q6T3U4 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.52■■□□□ 1.84
Npc1l1Q6T3U4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.51■■□□□ 1.83
Npc1l1Q6T3U4 Gm45444-201ENSMUST00000211394 898 ntBASIC26.51■■□□□ 1.83
Npc1l1Q6T3U4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Npc1l1Q6T3U4 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.51■■□□□ 1.83
Npc1l1Q6T3U4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Npc1l1Q6T3U4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Npc1l1Q6T3U4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Npc1l1Q6T3U4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Npc1l1Q6T3U4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Npc1l1Q6T3U4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Npc1l1Q6T3U4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.48■■□□□ 1.83
Npc1l1Q6T3U4 Rps24-207ENSMUST00000224568 714 ntBASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Npc1l1Q6T3U4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Npc1l1Q6T3U4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Npc1l1Q6T3U4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Npc1l1Q6T3U4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
Npc1l1Q6T3U4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.45■■□□□ 1.83
Npc1l1Q6T3U4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Npc1l1Q6T3U4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Npc1l1Q6T3U4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Npc1l1Q6T3U4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Npc1l1Q6T3U4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.44■■□□□ 1.82
Npc1l1Q6T3U4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.44■■□□□ 1.82
Npc1l1Q6T3U4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Npc1l1Q6T3U4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.43■■□□□ 1.82
Npc1l1Q6T3U4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Npc1l1Q6T3U4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.43■■□□□ 1.82
Npc1l1Q6T3U4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Npc1l1Q6T3U4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Npc1l1Q6T3U4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Npc1l1Q6T3U4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Npc1l1Q6T3U4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Npc1l1Q6T3U4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Npc1l1Q6T3U4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Npc1l1Q6T3U4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.4■■□□□ 1.82
Npc1l1Q6T3U4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Npc1l1Q6T3U4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.4■■□□□ 1.82
Npc1l1Q6T3U4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Npc1l1Q6T3U4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Npc1l1Q6T3U4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Npc1l1Q6T3U4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Npc1l1Q6T3U4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.39■■□□□ 1.82
Npc1l1Q6T3U4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Npc1l1Q6T3U4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Npc1l1Q6T3U4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.39■■□□□ 1.81
Npc1l1Q6T3U4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Npc1l1Q6T3U4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Npc1l1Q6T3U4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Npc1l1Q6T3U4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.38■■□□□ 1.81
Npc1l1Q6T3U4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Npc1l1Q6T3U4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Npc1l1Q6T3U4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Npc1l1Q6T3U4 Gm14117-201ENSMUST00000122417 843 ntBASIC26.37■■□□□ 1.81
Npc1l1Q6T3U4 Gm45102-201ENSMUST00000207427 857 ntBASIC26.37■■□□□ 1.81
Npc1l1Q6T3U4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Npc1l1Q6T3U4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Npc1l1Q6T3U4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms