Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Kdm3aQ6PCM1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Kdm3aQ6PCM1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Kdm3aQ6PCM1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Kdm3aQ6PCM1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Kdm3aQ6PCM1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Kdm3aQ6PCM1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.7■■□□□ 1.87
Kdm3aQ6PCM1 Gm5812-201ENSMUST00000061073 957 ntBASIC26.7■■□□□ 1.87
Kdm3aQ6PCM1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Kdm3aQ6PCM1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.7■■□□□ 1.86
Kdm3aQ6PCM1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Kdm3aQ6PCM1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Kdm3aQ6PCM1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Kdm3aQ6PCM1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Kdm3aQ6PCM1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Kdm3aQ6PCM1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Kdm3aQ6PCM1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Kdm3aQ6PCM1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Kdm3aQ6PCM1 Gm13238-201ENSMUST00000117655 780 ntBASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Kdm3aQ6PCM1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Kdm3aQ6PCM1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Kdm3aQ6PCM1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Kdm3aQ6PCM1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Kdm3aQ6PCM1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Kdm3aQ6PCM1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.64■■□□□ 1.85
Kdm3aQ6PCM1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Kdm3aQ6PCM1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Kdm3aQ6PCM1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Kdm3aQ6PCM1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Kdm3aQ6PCM1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Kdm3aQ6PCM1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Kdm3aQ6PCM1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Kdm3aQ6PCM1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Kdm3aQ6PCM1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Kdm3aQ6PCM1 Gm22567-201ENSMUST00000175542 342 ntBASIC26.61■■□□□ 1.85
Kdm3aQ6PCM1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Kdm3aQ6PCM1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Kdm3aQ6PCM1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Kdm3aQ6PCM1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.59■■□□□ 1.85
Kdm3aQ6PCM1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Kdm3aQ6PCM1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Kdm3aQ6PCM1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Kdm3aQ6PCM1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Kdm3aQ6PCM1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Kdm3aQ6PCM1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Kdm3aQ6PCM1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Kdm3aQ6PCM1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Kdm3aQ6PCM1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Kdm3aQ6PCM1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.57■■□□□ 1.84
Kdm3aQ6PCM1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Kdm3aQ6PCM1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Kdm3aQ6PCM1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Kdm3aQ6PCM1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Kdm3aQ6PCM1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Kdm3aQ6PCM1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Kdm3aQ6PCM1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Kdm3aQ6PCM1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Kdm3aQ6PCM1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.53■■□□□ 1.84
Kdm3aQ6PCM1 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.53■■□□□ 1.84
Kdm3aQ6PCM1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.53■■□□□ 1.84
Kdm3aQ6PCM1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Kdm3aQ6PCM1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Kdm3aQ6PCM1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Kdm3aQ6PCM1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Kdm3aQ6PCM1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Kdm3aQ6PCM1 Gm15546-201ENSMUST00000122095 826 ntBASIC26.52■■□□□ 1.84
Kdm3aQ6PCM1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms