Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.43■□□□□ 0.86
ParpbpQ6IRT3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ParpbpQ6IRT3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ParpbpQ6IRT3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ParpbpQ6IRT3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.43■□□□□ 0.86
ParpbpQ6IRT3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ParpbpQ6IRT3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ParpbpQ6IRT3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ParpbpQ6IRT3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ParpbpQ6IRT3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ParpbpQ6IRT3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ParpbpQ6IRT3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ParpbpQ6IRT3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ParpbpQ6IRT3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ParpbpQ6IRT3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ParpbpQ6IRT3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.39■□□□□ 0.85
ParpbpQ6IRT3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ParpbpQ6IRT3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
ParpbpQ6IRT3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ParpbpQ6IRT3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.38■□□□□ 0.85
ParpbpQ6IRT3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ParpbpQ6IRT3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ParpbpQ6IRT3 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.37■□□□□ 0.85
ParpbpQ6IRT3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ParpbpQ6IRT3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ParpbpQ6IRT3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ParpbpQ6IRT3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Gm14523-201ENSMUST00000117260 558 ntBASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Gm7332-201ENSMUST00000118351 454 ntBASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ParpbpQ6IRT3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Gm12366-201ENSMUST00000121722 873 ntBASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Gm5786-201ENSMUST00000085368 882 ntBASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ParpbpQ6IRT3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ParpbpQ6IRT3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ParpbpQ6IRT3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ParpbpQ6IRT3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ParpbpQ6IRT3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ParpbpQ6IRT3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ParpbpQ6IRT3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.33■□□□□ 0.85
ParpbpQ6IRT3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
ParpbpQ6IRT3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
ParpbpQ6IRT3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ParpbpQ6IRT3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
ParpbpQ6IRT3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ParpbpQ6IRT3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ParpbpQ6IRT3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Cap2-205ENSMUST00000225824 1634 ntBASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ParpbpQ6IRT3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ParpbpQ6IRT3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.31■□□□□ 0.84
ParpbpQ6IRT3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms