Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hes3Q61657 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hes3Q61657 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.85■□□□□ 0.61
Hes3Q61657 Terc-201ENSMUST00000082862 423 ntBASIC18.85■□□□□ 0.61
Hes3Q61657 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hes3Q61657 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hes3Q61657 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hes3Q61657 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hes3Q61657 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hes3Q61657 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hes3Q61657 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hes3Q61657 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hes3Q61657 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hes3Q61657 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hes3Q61657 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.83■□□□□ 0.6
Hes3Q61657 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hes3Q61657 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hes3Q61657 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hes3Q61657 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Hes3Q61657 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hes3Q61657 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.82■□□□□ 0.6
Hes3Q61657 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hes3Q61657 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hes3Q61657 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hes3Q61657 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hes3Q61657 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hes3Q61657 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hes3Q61657 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hes3Q61657 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hes3Q61657 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hes3Q61657 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hes3Q61657 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hes3Q61657 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hes3Q61657 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hes3Q61657 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hes3Q61657 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Hes3Q61657 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hes3Q61657 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hes3Q61657 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hes3Q61657 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hes3Q61657 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hes3Q61657 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hes3Q61657 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.77■□□□□ 0.6
Hes3Q61657 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.77■□□□□ 0.6
Hes3Q61657 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hes3Q61657 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hes3Q61657 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hes3Q61657 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hes3Q61657 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hes3Q61657 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Hes3Q61657 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.77■□□□□ 0.59
Hes3Q61657 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.76■□□□□ 0.59
Hes3Q61657 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.76■□□□□ 0.59
Hes3Q61657 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hes3Q61657 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hes3Q61657 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hes3Q61657 Gm6311-201ENSMUST00000073790 878 ntBASIC18.76■□□□□ 0.59
Hes3Q61657 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hes3Q61657 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.76■□□□□ 0.59
Hes3Q61657 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hes3Q61657 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hes3Q61657 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hes3Q61657 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hes3Q61657 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hes3Q61657 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.75■□□□□ 0.59
Hes3Q61657 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Hes3Q61657 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.74■□□□□ 0.59
Hes3Q61657 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hes3Q61657 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hes3Q61657 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes3Q61657 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hes3Q61657 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes3Q61657 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.73■□□□□ 0.59
Hes3Q61657 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes3Q61657 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hes3Q61657 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Hes3Q61657 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes3Q61657 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes3Q61657 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hes3Q61657 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes3Q61657 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hes3Q61657 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hes3Q61657 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hes3Q61657 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hes3Q61657 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hes3Q61657 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Hes3Q61657 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hes3Q61657 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hes3Q61657 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hes3Q61657 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hes3Q61657 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hes3Q61657 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hes3Q61657 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hes3Q61657 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms