Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.43■■□□□ 1.18
Col12a1Q60847 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Col12a1Q60847 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.43■■□□□ 1.18
Col12a1Q60847 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col12a1Q60847 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.42■■□□□ 1.18
Col12a1Q60847 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.42■■□□□ 1.18
Col12a1Q60847 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.42■■□□□ 1.18
Col12a1Q60847 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col12a1Q60847 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col12a1Q60847 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.41■■□□□ 1.18
Col12a1Q60847 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col12a1Q60847 Gm18284-201ENSMUST00000172604 624 ntBASIC22.41■■□□□ 1.18
Col12a1Q60847 Golgb1-201ENSMUST00000023534 498 ntBASIC22.41■■□□□ 1.18
Col12a1Q60847 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col12a1Q60847 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Col12a1Q60847 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col12a1Q60847 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col12a1Q60847 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col12a1Q60847 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col12a1Q60847 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col12a1Q60847 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col12a1Q60847 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.4■■□□□ 1.18
Col12a1Q60847 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Col12a1Q60847 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.18
Col12a1Q60847 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Col12a1Q60847 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col12a1Q60847 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Col12a1Q60847 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Col12a1Q60847 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.38■■□□□ 1.17
Col12a1Q60847 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col12a1Q60847 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.38■■□□□ 1.17
Col12a1Q60847 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col12a1Q60847 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Col12a1Q60847 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.37■■□□□ 1.17
Col12a1Q60847 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col12a1Q60847 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.37■■□□□ 1.17
Col12a1Q60847 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col12a1Q60847 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col12a1Q60847 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col12a1Q60847 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
Col12a1Q60847 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col12a1Q60847 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col12a1Q60847 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col12a1Q60847 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col12a1Q60847 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col12a1Q60847 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col12a1Q60847 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col12a1Q60847 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Col12a1Q60847 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.34■■□□□ 1.17
Col12a1Q60847 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Col12a1Q60847 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col12a1Q60847 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.34■■□□□ 1.17
Col12a1Q60847 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col12a1Q60847 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.33■■□□□ 1.17
Col12a1Q60847 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col12a1Q60847 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
Col12a1Q60847 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
Col12a1Q60847 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col12a1Q60847 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col12a1Q60847 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Col12a1Q60847 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col12a1Q60847 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Col12a1Q60847 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col12a1Q60847 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.32■■□□□ 1.16
Col12a1Q60847 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.32■■□□□ 1.16
Col12a1Q60847 Gm40881-201ENSMUST00000223397 166 ntBASIC22.32■■□□□ 1.16
Col12a1Q60847 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col12a1Q60847 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.31■■□□□ 1.16
Col12a1Q60847 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col12a1Q60847 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col12a1Q60847 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col12a1Q60847 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col12a1Q60847 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col12a1Q60847 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.29■■□□□ 1.16
Col12a1Q60847 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.29■■□□□ 1.16
Col12a1Q60847 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col12a1Q60847 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col12a1Q60847 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.27■■□□□ 1.16
Col12a1Q60847 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col12a1Q60847 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Col12a1Q60847 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col12a1Q60847 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.26■■□□□ 1.15
Col12a1Q60847 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col12a1Q60847 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col12a1Q60847 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col12a1Q60847 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col12a1Q60847 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col12a1Q60847 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col12a1Q60847 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.25■■□□□ 1.15
Col12a1Q60847 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.25■■□□□ 1.15
Col12a1Q60847 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col12a1Q60847 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.25■■□□□ 1.15
Col12a1Q60847 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.24■■□□□ 1.15
Col12a1Q60847 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.24■■□□□ 1.15
Col12a1Q60847 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.24■■□□□ 1.15
Col12a1Q60847 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms