Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.06■■□□□ 1.12
Col27a1Q5QNQ9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.06■■□□□ 1.12
Col27a1Q5QNQ9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Col27a1Q5QNQ9 Gm40881-201ENSMUST00000223397 166 ntBASIC22.06■■□□□ 1.12
Col27a1Q5QNQ9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.05■■□□□ 1.12
Col27a1Q5QNQ9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col27a1Q5QNQ9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Col27a1Q5QNQ9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col27a1Q5QNQ9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col27a1Q5QNQ9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.04■■□□□ 1.12
Col27a1Q5QNQ9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col27a1Q5QNQ9 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.04■■□□□ 1.12
Col27a1Q5QNQ9 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.04■■□□□ 1.12
Col27a1Q5QNQ9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.03■■□□□ 1.12
Col27a1Q5QNQ9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.03■■□□□ 1.12
Col27a1Q5QNQ9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col27a1Q5QNQ9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col27a1Q5QNQ9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col27a1Q5QNQ9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.02■■□□□ 1.12
Col27a1Q5QNQ9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col27a1Q5QNQ9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col27a1Q5QNQ9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col27a1Q5QNQ9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col27a1Q5QNQ9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col27a1Q5QNQ9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col27a1Q5QNQ9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col27a1Q5QNQ9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col27a1Q5QNQ9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.98■■□□□ 1.11
Col27a1Q5QNQ9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col27a1Q5QNQ9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col27a1Q5QNQ9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Col27a1Q5QNQ9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Col27a1Q5QNQ9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col27a1Q5QNQ9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col27a1Q5QNQ9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col27a1Q5QNQ9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.96■■□□□ 1.11
Col27a1Q5QNQ9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col27a1Q5QNQ9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col27a1Q5QNQ9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col27a1Q5QNQ9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col27a1Q5QNQ9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col27a1Q5QNQ9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Col27a1Q5QNQ9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
Col27a1Q5QNQ9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.94■■□□□ 1.1
Col27a1Q5QNQ9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.94■■□□□ 1.1
Col27a1Q5QNQ9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Col27a1Q5QNQ9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col27a1Q5QNQ9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col27a1Q5QNQ9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Col27a1Q5QNQ9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col27a1Q5QNQ9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.93■■□□□ 1.1
Col27a1Q5QNQ9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col27a1Q5QNQ9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Col27a1Q5QNQ9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Gm18284-201ENSMUST00000172604 624 ntBASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col27a1Q5QNQ9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col27a1Q5QNQ9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Col27a1Q5QNQ9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col27a1Q5QNQ9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col27a1Q5QNQ9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col27a1Q5QNQ9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col27a1Q5QNQ9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Col27a1Q5QNQ9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
Col27a1Q5QNQ9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.89■■□□□ 1.1
Col27a1Q5QNQ9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col27a1Q5QNQ9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col27a1Q5QNQ9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col27a1Q5QNQ9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.89■■□□□ 1.09
Col27a1Q5QNQ9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col27a1Q5QNQ9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.88■■□□□ 1.09
Col27a1Q5QNQ9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.88■■□□□ 1.09
Col27a1Q5QNQ9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col27a1Q5QNQ9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms