Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rc3h1Q4VGL6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rc3h1Q4VGL6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rc3h1Q4VGL6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rc3h1Q4VGL6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rc3h1Q4VGL6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.58■■□□□ 1.69
Rc3h1Q4VGL6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Rc3h1Q4VGL6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
Rc3h1Q4VGL6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Gm15546-201ENSMUST00000122095 826 ntBASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rc3h1Q4VGL6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rc3h1Q4VGL6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rc3h1Q4VGL6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rc3h1Q4VGL6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.55■■□□□ 1.68
Rc3h1Q4VGL6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Rc3h1Q4VGL6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rc3h1Q4VGL6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rc3h1Q4VGL6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rc3h1Q4VGL6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rc3h1Q4VGL6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
Rc3h1Q4VGL6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rc3h1Q4VGL6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rc3h1Q4VGL6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.53■■□□□ 1.68
Rc3h1Q4VGL6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Rc3h1Q4VGL6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Rc3h1Q4VGL6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rc3h1Q4VGL6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.52■■□□□ 1.68
Rc3h1Q4VGL6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rc3h1Q4VGL6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.51■■□□□ 1.67
Rc3h1Q4VGL6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rc3h1Q4VGL6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rc3h1Q4VGL6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rc3h1Q4VGL6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.5■■□□□ 1.67
Rc3h1Q4VGL6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rc3h1Q4VGL6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rc3h1Q4VGL6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rc3h1Q4VGL6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.5■■□□□ 1.67
Rc3h1Q4VGL6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rc3h1Q4VGL6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rc3h1Q4VGL6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Rc3h1Q4VGL6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rc3h1Q4VGL6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Rc3h1Q4VGL6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rc3h1Q4VGL6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Rc3h1Q4VGL6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rc3h1Q4VGL6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rc3h1Q4VGL6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rc3h1Q4VGL6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rc3h1Q4VGL6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.48■■□□□ 1.67
Rc3h1Q4VGL6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rc3h1Q4VGL6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rc3h1Q4VGL6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Rc3h1Q4VGL6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rc3h1Q4VGL6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.47■■□□□ 1.67
Rc3h1Q4VGL6 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.47■■□□□ 1.67
Rc3h1Q4VGL6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rc3h1Q4VGL6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Rc3h1Q4VGL6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rc3h1Q4VGL6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rc3h1Q4VGL6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 Gm15820-201ENSMUST00000201566 728 ntBASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.44■■□□□ 1.66
Rc3h1Q4VGL6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rc3h1Q4VGL6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rc3h1Q4VGL6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.43■■□□□ 1.66
Rc3h1Q4VGL6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rc3h1Q4VGL6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Rc3h1Q4VGL6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rc3h1Q4VGL6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rc3h1Q4VGL6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.42■■□□□ 1.66
Rc3h1Q4VGL6 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.41■■□□□ 1.66
Rc3h1Q4VGL6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Rc3h1Q4VGL6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rc3h1Q4VGL6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Rc3h1Q4VGL6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rc3h1Q4VGL6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 228 ms