Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC40.03■■■■■ 4
Pds5bQ4VA53 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC40.02■■■■■ 4
Pds5bQ4VA53 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC40.01■■■■■ 4
Pds5bQ4VA53 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Pds5bQ4VA53 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Pds5bQ4VA53 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
Pds5bQ4VA53 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC39.98■■■■□ 3.99
Pds5bQ4VA53 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC39.98■■■■□ 3.99
Pds5bQ4VA53 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
Pds5bQ4VA53 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Pds5bQ4VA53 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Pds5bQ4VA53 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC39.97■■■■□ 3.99
Pds5bQ4VA53 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC39.97■■■■□ 3.99
Pds5bQ4VA53 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC39.97■■■■□ 3.99
Pds5bQ4VA53 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC39.96■■■■□ 3.99
Pds5bQ4VA53 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC39.95■■■■□ 3.99
Pds5bQ4VA53 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC39.95■■■■□ 3.99
Pds5bQ4VA53 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
Pds5bQ4VA53 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC39.95■■■■□ 3.99
Pds5bQ4VA53 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Pds5bQ4VA53 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC39.94■■■■□ 3.98
Pds5bQ4VA53 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Pds5bQ4VA53 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC39.93■■■■□ 3.98
Pds5bQ4VA53 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
Pds5bQ4VA53 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC39.91■■■■□ 3.98
Pds5bQ4VA53 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC39.91■■■■□ 3.98
Pds5bQ4VA53 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Pds5bQ4VA53 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC39.9■■■■□ 3.98
Pds5bQ4VA53 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC39.89■■■■□ 3.98
Pds5bQ4VA53 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC39.89■■■■□ 3.98
Pds5bQ4VA53 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
Pds5bQ4VA53 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
Pds5bQ4VA53 Golgb1-201ENSMUST00000023534 498 ntBASIC39.88■■■■□ 3.97
Pds5bQ4VA53 Gm7199-201ENSMUST00000118327 1485 ntBASIC39.87■■■■□ 3.97
Pds5bQ4VA53 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
Pds5bQ4VA53 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
Pds5bQ4VA53 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC39.85■■■■□ 3.97
Pds5bQ4VA53 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Pds5bQ4VA53 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC39.84■■■■□ 3.97
Pds5bQ4VA53 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC39.84■■■■□ 3.97
Pds5bQ4VA53 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC39.84■■■■□ 3.97
Pds5bQ4VA53 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
Pds5bQ4VA53 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Pds5bQ4VA53 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC39.83■■■■□ 3.97
Pds5bQ4VA53 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Pds5bQ4VA53 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC39.83■■■■□ 3.97
Pds5bQ4VA53 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Pds5bQ4VA53 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC39.82■■■■□ 3.97
Pds5bQ4VA53 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
Pds5bQ4VA53 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC39.82■■■■□ 3.96
Pds5bQ4VA53 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC39.82■■■■□ 3.96
Pds5bQ4VA53 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC39.81■■■■□ 3.96
Pds5bQ4VA53 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC39.81■■■■□ 3.96
Pds5bQ4VA53 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC39.81■■■■□ 3.96
Pds5bQ4VA53 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC39.81■■■■□ 3.96
Pds5bQ4VA53 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Pds5bQ4VA53 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
Pds5bQ4VA53 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Pds5bQ4VA53 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Pds5bQ4VA53 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC39.8■■■■□ 3.96
Pds5bQ4VA53 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
Pds5bQ4VA53 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC39.79■■■■□ 3.96
Pds5bQ4VA53 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC39.79■■■■□ 3.96
Pds5bQ4VA53 Gm29257-201ENSMUST00000186115 639 ntBASIC39.79■■■■□ 3.96
Pds5bQ4VA53 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC39.79■■■■□ 3.96
Pds5bQ4VA53 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
Pds5bQ4VA53 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC39.78■■■■□ 3.96
Pds5bQ4VA53 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Pds5bQ4VA53 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Pds5bQ4VA53 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Pds5bQ4VA53 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Pds5bQ4VA53 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Pds5bQ4VA53 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC39.75■■■■□ 3.95
Pds5bQ4VA53 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC39.75■■■■□ 3.95
Pds5bQ4VA53 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC39.74■■■■□ 3.95
Pds5bQ4VA53 Gm28536-201ENSMUST00000190971 1317 ntBASIC39.74■■■■□ 3.95
Pds5bQ4VA53 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC39.74■■■■□ 3.95
Pds5bQ4VA53 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Pds5bQ4VA53 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC39.74■■■■□ 3.95
Pds5bQ4VA53 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC39.74■■■■□ 3.95
Pds5bQ4VA53 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC39.73■■■■□ 3.95
Pds5bQ4VA53 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
Pds5bQ4VA53 Zxda-201ENSMUST00000117281 2621 ntBASIC39.72■■■■□ 3.95
Pds5bQ4VA53 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC39.72■■■■□ 3.95
Pds5bQ4VA53 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Pds5bQ4VA53 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
Pds5bQ4VA53 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Pds5bQ4VA53 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC39.7■■■■□ 3.95
Pds5bQ4VA53 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
Pds5bQ4VA53 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Pds5bQ4VA53 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC39.67■■■■□ 3.94
Pds5bQ4VA53 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
Pds5bQ4VA53 Gm10399-202ENSMUST00000202768 748 ntBASIC39.67■■■■□ 3.94
Pds5bQ4VA53 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC39.67■■■■□ 3.94
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms