Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.58■□□□□ 0.88
Lrrk1Q3UHC2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrk1Q3UHC2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrk1Q3UHC2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrk1Q3UHC2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lrrk1Q3UHC2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrk1Q3UHC2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.56■□□□□ 0.88
Lrrk1Q3UHC2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrk1Q3UHC2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrk1Q3UHC2 Gm5921-201ENSMUST00000075898 882 ntBASIC20.56■□□□□ 0.88
Lrrk1Q3UHC2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrk1Q3UHC2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrk1Q3UHC2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrk1Q3UHC2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lrrk1Q3UHC2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrk1Q3UHC2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrk1Q3UHC2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrk1Q3UHC2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrk1Q3UHC2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrk1Q3UHC2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lrrk1Q3UHC2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lrrk1Q3UHC2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrk1Q3UHC2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Lrrk1Q3UHC2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrk1Q3UHC2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrk1Q3UHC2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Lrrk1Q3UHC2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lrrk1Q3UHC2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrk1Q3UHC2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lrrk1Q3UHC2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk1Q3UHC2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk1Q3UHC2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk1Q3UHC2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk1Q3UHC2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Lrrk1Q3UHC2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrk1Q3UHC2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrk1Q3UHC2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrk1Q3UHC2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Lrrk1Q3UHC2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.46■□□□□ 0.87
Lrrk1Q3UHC2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lrrk1Q3UHC2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.46■□□□□ 0.87
Lrrk1Q3UHC2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lrrk1Q3UHC2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk1Q3UHC2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk1Q3UHC2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrk1Q3UHC2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
Lrrk1Q3UHC2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrk1Q3UHC2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrk1Q3UHC2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrk1Q3UHC2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.41■□□□□ 0.86
Lrrk1Q3UHC2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrk1Q3UHC2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrk1Q3UHC2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrrk1Q3UHC2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Lrrk1Q3UHC2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lrrk1Q3UHC2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.4■□□□□ 0.86
Lrrk1Q3UHC2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lrrk1Q3UHC2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lrrk1Q3UHC2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lrrk1Q3UHC2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrk1Q3UHC2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Lrrk1Q3UHC2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrk1Q3UHC2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms