Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc28Q3TX51 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lrrc28Q3TX51 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc28Q3TX51 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.84■□□□□ 0.93
Lrrc28Q3TX51 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lrrc28Q3TX51 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.83■□□□□ 0.93
Lrrc28Q3TX51 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lrrc28Q3TX51 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lrrc28Q3TX51 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrrc28Q3TX51 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lrrc28Q3TX51 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrrc28Q3TX51 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.81■□□□□ 0.92
Lrrc28Q3TX51 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lrrc28Q3TX51 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrrc28Q3TX51 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrrc28Q3TX51 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc28Q3TX51 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Lrrc28Q3TX51 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Lrrc28Q3TX51 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc28Q3TX51 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc28Q3TX51 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc28Q3TX51 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Lrrc28Q3TX51 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.76■□□□□ 0.91
Lrrc28Q3TX51 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc28Q3TX51 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc28Q3TX51 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Lrrc28Q3TX51 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrc28Q3TX51 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Lrrc28Q3TX51 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lrrc28Q3TX51 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Gm15820-201ENSMUST00000201566 728 ntBASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc28Q3TX51 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc28Q3TX51 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc28Q3TX51 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lrrc28Q3TX51 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc28Q3TX51 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc28Q3TX51 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc28Q3TX51 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc28Q3TX51 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc28Q3TX51 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.71■□□□□ 0.91
Lrrc28Q3TX51 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Lrrc28Q3TX51 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lrrc28Q3TX51 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc28Q3TX51 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc28Q3TX51 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc28Q3TX51 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc28Q3TX51 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc28Q3TX51 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc28Q3TX51 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms