Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ube2d3P61079 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.61■□□□□ 0.09
Ube2d3P61079 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ube2d3P61079 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ube2d3P61079 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.6■□□□□ 0.09
Ube2d3P61079 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.6■□□□□ 0.09
Ube2d3P61079 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube2d3P61079 Gm11599-201ENSMUST00000118720 878 ntBASIC15.6■□□□□ 0.09
Ube2d3P61079 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.6■□□□□ 0.09
Ube2d3P61079 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube2d3P61079 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube2d3P61079 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube2d3P61079 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube2d3P61079 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube2d3P61079 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube2d3P61079 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube2d3P61079 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.59■□□□□ 0.09
Ube2d3P61079 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube2d3P61079 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ube2d3P61079 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ube2d3P61079 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube2d3P61079 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.58■□□□□ 0.08
Ube2d3P61079 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube2d3P61079 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube2d3P61079 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube2d3P61079 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube2d3P61079 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube2d3P61079 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ube2d3P61079 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.58■□□□□ 0.08
Ube2d3P61079 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.58■□□□□ 0.08
Ube2d3P61079 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ube2d3P61079 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ube2d3P61079 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ube2d3P61079 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.57■□□□□ 0.08
Ube2d3P61079 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.57■□□□□ 0.08
Ube2d3P61079 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Ube2d3P61079 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ube2d3P61079 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ube2d3P61079 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube2d3P61079 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ube2d3P61079 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.56■□□□□ 0.08
Ube2d3P61079 Gm45364-201ENSMUST00000210883 159 ntBASIC15.56■□□□□ 0.08
Ube2d3P61079 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube2d3P61079 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube2d3P61079 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube2d3P61079 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ube2d3P61079 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube2d3P61079 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ube2d3P61079 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube2d3P61079 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.55■□□□□ 0.08
Ube2d3P61079 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.55■□□□□ 0.08
Ube2d3P61079 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube2d3P61079 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube2d3P61079 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube2d3P61079 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube2d3P61079 Terc-201ENSMUST00000082862 423 ntBASIC15.54■□□□□ 0.08
Ube2d3P61079 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.54■□□□□ 0.08
Ube2d3P61079 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube2d3P61079 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube2d3P61079 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube2d3P61079 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ube2d3P61079 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube2d3P61079 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.53■□□□□ 0.08
Ube2d3P61079 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.53■□□□□ 0.08
Ube2d3P61079 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube2d3P61079 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube2d3P61079 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube2d3P61079 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube2d3P61079 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube2d3P61079 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube2d3P61079 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube2d3P61079 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ube2d3P61079 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ube2d3P61079 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ube2d3P61079 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube2d3P61079 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ube2d3P61079 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube2d3P61079 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ube2d3P61079 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.51■□□□□ 0.07
Ube2d3P61079 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ube2d3P61079 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube2d3P61079 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube2d3P61079 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube2d3P61079 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Ube2d3P61079 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ube2d3P61079 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube2d3P61079 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube2d3P61079 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ube2d3P61079 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube2d3P61079 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ube2d3P61079 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube2d3P61079 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube2d3P61079 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube2d3P61079 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms