Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn1P54254 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn1P54254 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.76■■□□□ 1.07
Atxn1P54254 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn1P54254 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn1P54254 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn1P54254 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn1P54254 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Atxn1P54254 Gm21956-201ENSMUST00000179946 522 ntBASIC21.74■■□□□ 1.07
Atxn1P54254 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn1P54254 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn1P54254 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn1P54254 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn1P54254 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Atxn1P54254 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn1P54254 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn1P54254 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Atxn1P54254 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn1P54254 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn1P54254 Gm9847-201ENSMUST00000052528 599 ntBASIC21.73■■□□□ 1.07
Atxn1P54254 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Atxn1P54254 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atxn1P54254 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atxn1P54254 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atxn1P54254 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atxn1P54254 Gm7417-201ENSMUST00000192950 473 ntBASIC21.7■■□□□ 1.06
Atxn1P54254 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.7■■□□□ 1.06
Atxn1P54254 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Atxn1P54254 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atxn1P54254 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Atxn1P54254 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atxn1P54254 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atxn1P54254 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.68■■□□□ 1.06
Atxn1P54254 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.68■■□□□ 1.06
Atxn1P54254 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.68■■□□□ 1.06
Atxn1P54254 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.68■■□□□ 1.06
Atxn1P54254 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.68■■□□□ 1.06
Atxn1P54254 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atxn1P54254 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atxn1P54254 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atxn1P54254 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.67■■□□□ 1.06
Atxn1P54254 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.66■■□□□ 1.06
Atxn1P54254 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atxn1P54254 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atxn1P54254 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atxn1P54254 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atxn1P54254 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Atxn1P54254 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Atxn1P54254 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atxn1P54254 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atxn1P54254 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atxn1P54254 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atxn1P54254 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atxn1P54254 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Atxn1P54254 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.64■■□□□ 1.05
Atxn1P54254 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Atxn1P54254 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atxn1P54254 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.63■■□□□ 1.05
Atxn1P54254 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Atxn1P54254 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atxn1P54254 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.63■■□□□ 1.05
Atxn1P54254 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.63■■□□□ 1.05
Atxn1P54254 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Atxn1P54254 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atxn1P54254 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Atxn1P54254 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atxn1P54254 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atxn1P54254 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Atxn1P54254 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atxn1P54254 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atxn1P54254 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Atxn1P54254 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Atxn1P54254 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atxn1P54254 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atxn1P54254 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.6■■□□□ 1.05
Atxn1P54254 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atxn1P54254 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Atxn1P54254 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atxn1P54254 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Atxn1P54254 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.59■■□□□ 1.05
Atxn1P54254 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Atxn1P54254 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.59■■□□□ 1.05
Atxn1P54254 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Atxn1P54254 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atxn1P54254 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atxn1P54254 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atxn1P54254 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atxn1P54254 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atxn1P54254 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atxn1P54254 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.58■■□□□ 1.05
Atxn1P54254 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Atxn1P54254 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atxn1P54254 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atxn1P54254 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms