Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcl12P40224 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.12■■□□□ 1.29
Cxcl12P40224 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcl12P40224 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcl12P40224 Gm12821-201ENSMUST00000120022 600 ntBASIC23.12■■□□□ 1.29
Cxcl12P40224 Gm12922-201ENSMUST00000120626 809 ntBASIC23.12■■□□□ 1.29
Cxcl12P40224 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.12■■□□□ 1.29
Cxcl12P40224 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcl12P40224 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.12■■□□□ 1.29
Cxcl12P40224 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.12■■□□□ 1.29
Cxcl12P40224 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cxcl12P40224 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cxcl12P40224 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cxcl12P40224 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cxcl12P40224 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cxcl12P40224 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.1■■□□□ 1.29
Cxcl12P40224 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.1■■□□□ 1.29
Cxcl12P40224 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cxcl12P40224 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cxcl12P40224 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Cxcl12P40224 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.08■■□□□ 1.29
Cxcl12P40224 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cxcl12P40224 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cxcl12P40224 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.08■■□□□ 1.28
Cxcl12P40224 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.07■■□□□ 1.28
Cxcl12P40224 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.07■■□□□ 1.28
Cxcl12P40224 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.07■■□□□ 1.28
Cxcl12P40224 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cxcl12P40224 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cxcl12P40224 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.07■■□□□ 1.28
Cxcl12P40224 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cxcl12P40224 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cxcl12P40224 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cxcl12P40224 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cxcl12P40224 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cxcl12P40224 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Cxcl12P40224 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cxcl12P40224 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Cxcl12P40224 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cxcl12P40224 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Cxcl12P40224 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.04■■□□□ 1.28
Cxcl12P40224 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cxcl12P40224 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cxcl12P40224 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cxcl12P40224 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Cxcl12P40224 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cxcl12P40224 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Cxcl12P40224 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.02■■□□□ 1.28
Cxcl12P40224 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Cxcl12P40224 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cxcl12P40224 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cxcl12P40224 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cxcl12P40224 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cxcl12P40224 Gm27454-201ENSMUST00000185090 204 ntBASIC23.01■■□□□ 1.27
Cxcl12P40224 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cxcl12P40224 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.01■■□□□ 1.27
Cxcl12P40224 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.01■■□□□ 1.27
Cxcl12P40224 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cxcl12P40224 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.99■■□□□ 1.27
Cxcl12P40224 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.99■■□□□ 1.27
Cxcl12P40224 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.99■■□□□ 1.27
Cxcl12P40224 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cxcl12P40224 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cxcl12P40224 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.98■■□□□ 1.27
Cxcl12P40224 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.98■■□□□ 1.27
Cxcl12P40224 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cxcl12P40224 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cxcl12P40224 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
Cxcl12P40224 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
Cxcl12P40224 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Cxcl12P40224 Gm45417-201ENSMUST00000209533 758 ntBASIC22.97■■□□□ 1.27
Cxcl12P40224 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cxcl12P40224 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cxcl12P40224 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Cxcl12P40224 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cxcl12P40224 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.95■■□□□ 1.26
Cxcl12P40224 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Cxcl12P40224 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.95■■□□□ 1.26
Cxcl12P40224 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cxcl12P40224 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cxcl12P40224 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cxcl12P40224 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.94■■□□□ 1.26
Cxcl12P40224 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Cxcl12P40224 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cxcl12P40224 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cxcl12P40224 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
Cxcl12P40224 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cxcl12P40224 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cxcl12P40224 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.93■■□□□ 1.26
Cxcl12P40224 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cxcl12P40224 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cxcl12P40224 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cxcl12P40224 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cxcl12P40224 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cxcl12P40224 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cxcl12P40224 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cxcl12P40224 Gm10399-202ENSMUST00000202768 748 ntBASIC22.91■■□□□ 1.26
Cxcl12P40224 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.91■■□□□ 1.26
Cxcl12P40224 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cxcl12P40224 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms