Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Thbs1P35441 Scarna2-201ENSMUST00000157560 414 ntBASIC20.26■□□□□ 0.83
Thbs1P35441 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thbs1P35441 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thbs1P35441 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thbs1P35441 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thbs1P35441 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thbs1P35441 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Thbs1P35441 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thbs1P35441 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Thbs1P35441 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Thbs1P35441 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thbs1P35441 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Thbs1P35441 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thbs1P35441 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thbs1P35441 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thbs1P35441 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thbs1P35441 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thbs1P35441 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thbs1P35441 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thbs1P35441 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Thbs1P35441 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Thbs1P35441 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thbs1P35441 Gm16437-201ENSMUST00000025669 507 ntBASIC20.22■□□□□ 0.83
Thbs1P35441 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thbs1P35441 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thbs1P35441 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Thbs1P35441 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thbs1P35441 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.21■□□□□ 0.83
Thbs1P35441 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Thbs1P35441 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Thbs1P35441 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thbs1P35441 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Thbs1P35441 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Thbs1P35441 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thbs1P35441 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.2■□□□□ 0.82
Thbs1P35441 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thbs1P35441 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thbs1P35441 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thbs1P35441 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Thbs1P35441 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Thbs1P35441 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thbs1P35441 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thbs1P35441 Gm11687-201ENSMUST00000118911 886 ntBASIC20.19■□□□□ 0.82
Thbs1P35441 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thbs1P35441 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thbs1P35441 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thbs1P35441 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.18■□□□□ 0.82
Thbs1P35441 Cap2-205ENSMUST00000225824 1634 ntBASIC20.18■□□□□ 0.82
Thbs1P35441 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.18■□□□□ 0.82
Thbs1P35441 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thbs1P35441 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thbs1P35441 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thbs1P35441 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thbs1P35441 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thbs1P35441 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Thbs1P35441 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thbs1P35441 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.15■□□□□ 0.82
Thbs1P35441 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.15■□□□□ 0.82
Thbs1P35441 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thbs1P35441 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Thbs1P35441 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.14■□□□□ 0.82
Thbs1P35441 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thbs1P35441 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thbs1P35441 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Thbs1P35441 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thbs1P35441 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Thbs1P35441 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thbs1P35441 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Thbs1P35441 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thbs1P35441 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thbs1P35441 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thbs1P35441 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thbs1P35441 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thbs1P35441 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Thbs1P35441 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thbs1P35441 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thbs1P35441 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thbs1P35441 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thbs1P35441 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Thbs1P35441 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Thbs1P35441 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thbs1P35441 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.11■□□□□ 0.81
Thbs1P35441 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thbs1P35441 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thbs1P35441 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.11■□□□□ 0.81
Thbs1P35441 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thbs1P35441 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Thbs1P35441 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Thbs1P35441 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Thbs1P35441 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms