Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04212 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P04212 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04212 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04212 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04212 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04212 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04212 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04212 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.71■□□□□ 0.43
P04212 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04212 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04212 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04212 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
P04212 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04212 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.71■□□□□ 0.43
P04212 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
P04212 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P04212 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04212 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.7■□□□□ 0.42
P04212 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04212 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
P04212 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04212 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.7■□□□□ 0.42
P04212 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04212 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.69■□□□□ 0.42
P04212 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P04212 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04212 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.67■□□□□ 0.42
P04212 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.67■□□□□ 0.42
P04212 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04212 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04212 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04212 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04212 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P04212 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04212 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04212 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.66■□□□□ 0.42
P04212 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
P04212 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04212 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
P04212 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04212 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04212 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.64■□□□□ 0.41
P04212 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.64■□□□□ 0.41
P04212 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.64■□□□□ 0.41
P04212 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
P04212 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04212 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
P04212 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04212 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
P04212 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.62■□□□□ 0.41
P04212 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04212 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04212 Notumos-201ENSMUST00000151998 2659 ntBASIC17.62■□□□□ 0.41
P04212 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04212 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04212 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04212 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04212 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04212 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04212 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.6■□□□□ 0.41
P04212 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04212 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04212 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04212 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04212 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
P04212 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04212 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04212 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.59■□□□□ 0.41
P04212 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.59■□□□□ 0.41
P04212 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04212 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms