Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Abcd4O89016 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Abcd4O89016 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcd4O89016 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcd4O89016 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcd4O89016 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcd4O89016 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcd4O89016 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.69■□□□□ 0.74
Abcd4O89016 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Abcd4O89016 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Abcd4O89016 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.69■□□□□ 0.74
Abcd4O89016 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcd4O89016 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Abcd4O89016 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.68■□□□□ 0.74
Abcd4O89016 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Abcd4O89016 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Abcd4O89016 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcd4O89016 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcd4O89016 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcd4O89016 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.67■□□□□ 0.74
Abcd4O89016 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abcd4O89016 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcd4O89016 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Abcd4O89016 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcd4O89016 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.67■□□□□ 0.74
Abcd4O89016 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.67■□□□□ 0.74
Abcd4O89016 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.66■□□□□ 0.74
Abcd4O89016 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Abcd4O89016 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Abcd4O89016 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcd4O89016 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcd4O89016 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcd4O89016 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Abcd4O89016 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Abcd4O89016 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Abcd4O89016 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcd4O89016 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Abcd4O89016 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Abcd4O89016 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Abcd4O89016 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abcd4O89016 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abcd4O89016 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Abcd4O89016 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcd4O89016 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcd4O89016 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcd4O89016 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcd4O89016 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.63■□□□□ 0.73
Abcd4O89016 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcd4O89016 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Abcd4O89016 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.63■□□□□ 0.73
Abcd4O89016 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Abcd4O89016 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
Abcd4O89016 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcd4O89016 Gm15546-201ENSMUST00000122095 826 ntBASIC19.62■□□□□ 0.73
Abcd4O89016 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.62■□□□□ 0.73
Abcd4O89016 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.62■□□□□ 0.73
Abcd4O89016 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.62■□□□□ 0.73
Abcd4O89016 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcd4O89016 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Abcd4O89016 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcd4O89016 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcd4O89016 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcd4O89016 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.61■□□□□ 0.73
Abcd4O89016 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Abcd4O89016 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.61■□□□□ 0.73
Abcd4O89016 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.61■□□□□ 0.73
Abcd4O89016 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.61■□□□□ 0.73
Abcd4O89016 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.61■□□□□ 0.73
Abcd4O89016 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Abcd4O89016 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcd4O89016 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcd4O89016 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Abcd4O89016 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcd4O89016 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcd4O89016 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Abcd4O89016 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcd4O89016 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.6■□□□□ 0.73
Abcd4O89016 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.6■□□□□ 0.73
Abcd4O89016 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abcd4O89016 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcd4O89016 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcd4O89016 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcd4O89016 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcd4O89016 Gm45444-201ENSMUST00000211394 898 ntBASIC19.58■□□□□ 0.72
Abcd4O89016 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcd4O89016 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms