Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.86■□□□□ 0.93
Hcn1O88704 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn1O88704 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn1O88704 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.86■□□□□ 0.93
Hcn1O88704 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn1O88704 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn1O88704 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hcn1O88704 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.86■□□□□ 0.93
Hcn1O88704 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.85■□□□□ 0.93
Hcn1O88704 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcn1O88704 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn1O88704 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn1O88704 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn1O88704 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn1O88704 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn1O88704 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.84■□□□□ 0.93
Hcn1O88704 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcn1O88704 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn1O88704 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn1O88704 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hcn1O88704 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn1O88704 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn1O88704 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn1O88704 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hcn1O88704 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.83■□□□□ 0.93
Hcn1O88704 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hcn1O88704 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Hcn1O88704 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn1O88704 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn1O88704 Cap2-205ENSMUST00000225824 1634 ntBASIC20.82■□□□□ 0.92
Hcn1O88704 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcn1O88704 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.81■□□□□ 0.92
Hcn1O88704 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcn1O88704 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcn1O88704 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcn1O88704 Gm27502-201ENSMUST00000183495 199 ntBASIC20.81■□□□□ 0.92
Hcn1O88704 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn1O88704 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn1O88704 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hcn1O88704 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.8■□□□□ 0.92
Hcn1O88704 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn1O88704 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn1O88704 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn1O88704 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcn1O88704 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.79■□□□□ 0.92
Hcn1O88704 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.78■□□□□ 0.92
Hcn1O88704 Gm12366-201ENSMUST00000121722 873 ntBASIC20.78■□□□□ 0.92
Hcn1O88704 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.78■□□□□ 0.92
Hcn1O88704 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.78■□□□□ 0.92
Hcn1O88704 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn1O88704 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.78■□□□□ 0.92
Hcn1O88704 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.78■□□□□ 0.92
Hcn1O88704 Gm5786-201ENSMUST00000085368 882 ntBASIC20.78■□□□□ 0.92
Hcn1O88704 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn1O88704 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn1O88704 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn1O88704 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn1O88704 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Hcn1O88704 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.77■□□□□ 0.92
Hcn1O88704 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn1O88704 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hcn1O88704 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.77■□□□□ 0.91
Hcn1O88704 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hcn1O88704 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.76■□□□□ 0.91
Hcn1O88704 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hcn1O88704 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn1O88704 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn1O88704 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn1O88704 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn1O88704 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hcn1O88704 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
Hcn1O88704 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn1O88704 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn1O88704 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn1O88704 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn1O88704 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hcn1O88704 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hcn1O88704 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hcn1O88704 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcn1O88704 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcn1O88704 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.73■□□□□ 0.91
Hcn1O88704 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn1O88704 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn1O88704 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.72■□□□□ 0.91
Hcn1O88704 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.72■□□□□ 0.91
Hcn1O88704 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn1O88704 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms