Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf17O88472 Gm18284-201ENSMUST00000172604 624 ntBASIC20.72■□□□□ 0.91
Tnfrsf17O88472 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.72■□□□□ 0.91
Tnfrsf17O88472 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf17O88472 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf17O88472 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf17O88472 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf17O88472 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf17O88472 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf17O88472 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfrsf17O88472 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.7■□□□□ 0.9
Tnfrsf17O88472 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.7■□□□□ 0.9
Tnfrsf17O88472 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf17O88472 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf17O88472 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf17O88472 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf17O88472 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.68■□□□□ 0.9
Tnfrsf17O88472 Gm29257-201ENSMUST00000186115 639 ntBASIC20.68■□□□□ 0.9
Tnfrsf17O88472 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.68■□□□□ 0.9
Tnfrsf17O88472 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf17O88472 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf17O88472 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf17O88472 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf17O88472 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf17O88472 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf17O88472 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf17O88472 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf17O88472 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf17O88472 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf17O88472 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf17O88472 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf17O88472 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf17O88472 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf17O88472 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf17O88472 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf17O88472 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.64■□□□□ 0.9
Tnfrsf17O88472 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnfrsf17O88472 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Tnfrsf17O88472 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf17O88472 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf17O88472 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf17O88472 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf17O88472 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf17O88472 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnfrsf17O88472 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tnfrsf17O88472 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.6■□□□□ 0.89
Tnfrsf17O88472 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf17O88472 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf17O88472 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf17O88472 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.59■□□□□ 0.89
Tnfrsf17O88472 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf17O88472 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf17O88472 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf17O88472 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Tnfrsf17O88472 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf17O88472 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf17O88472 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.57■□□□□ 0.88
Tnfrsf17O88472 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf17O88472 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf17O88472 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnfrsf17O88472 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf17O88472 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tnfrsf17O88472 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms