Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.12■■□□□ 1.13
Cacna1hO88427 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.11■■□□□ 1.13
Cacna1hO88427 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cacna1hO88427 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cacna1hO88427 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cacna1hO88427 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.11■■□□□ 1.13
Cacna1hO88427 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
Cacna1hO88427 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cacna1hO88427 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cacna1hO88427 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cacna1hO88427 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cacna1hO88427 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cacna1hO88427 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Cacna1hO88427 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cacna1hO88427 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cacna1hO88427 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.08■■□□□ 1.13
Cacna1hO88427 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cacna1hO88427 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cacna1hO88427 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.07■■□□□ 1.12
Cacna1hO88427 Gm40881-201ENSMUST00000223397 166 ntBASIC22.07■■□□□ 1.12
Cacna1hO88427 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cacna1hO88427 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.07■■□□□ 1.12
Cacna1hO88427 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Cacna1hO88427 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacna1hO88427 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.06■■□□□ 1.12
Cacna1hO88427 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Cacna1hO88427 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cacna1hO88427 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.05■■□□□ 1.12
Cacna1hO88427 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacna1hO88427 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.05■■□□□ 1.12
Cacna1hO88427 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacna1hO88427 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacna1hO88427 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacna1hO88427 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.04■■□□□ 1.12
Cacna1hO88427 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.04■■□□□ 1.12
Cacna1hO88427 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacna1hO88427 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacna1hO88427 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cacna1hO88427 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.04■■□□□ 1.12
Cacna1hO88427 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.04■■□□□ 1.12
Cacna1hO88427 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.04■■□□□ 1.12
Cacna1hO88427 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacna1hO88427 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacna1hO88427 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.03■■□□□ 1.12
Cacna1hO88427 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.03■■□□□ 1.12
Cacna1hO88427 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cacna1hO88427 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
Cacna1hO88427 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacna1hO88427 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cacna1hO88427 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cacna1hO88427 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cacna1hO88427 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cacna1hO88427 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1hO88427 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1hO88427 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1hO88427 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cacna1hO88427 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cacna1hO88427 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1hO88427 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.99■■□□□ 1.11
Cacna1hO88427 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.99■■□□□ 1.11
Cacna1hO88427 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.99■■□□□ 1.11
Cacna1hO88427 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1hO88427 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1hO88427 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.99■■□□□ 1.11
Cacna1hO88427 Gm5874-201ENSMUST00000096101 508 ntBASIC21.99■■□□□ 1.11
Cacna1hO88427 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.98■■□□□ 1.11
Cacna1hO88427 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cacna1hO88427 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cacna1hO88427 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cacna1hO88427 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cacna1hO88427 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cacna1hO88427 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cacna1hO88427 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1hO88427 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Cacna1hO88427 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1hO88427 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1hO88427 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1hO88427 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1hO88427 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Cacna1hO88427 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cacna1hO88427 Gm27011-201ENSMUST00000182352 972 ntBASIC21.96■■□□□ 1.11
Cacna1hO88427 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cacna1hO88427 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cacna1hO88427 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cacna1hO88427 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.96■■□□□ 1.11
Cacna1hO88427 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.96■■□□□ 1.11
Cacna1hO88427 Gm6139-201ENSMUST00000079261 882 ntBASIC21.96■■□□□ 1.11
Cacna1hO88427 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.95■■□□□ 1.1
Cacna1hO88427 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.95■■□□□ 1.1
Cacna1hO88427 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.95■■□□□ 1.1
Cacna1hO88427 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cacna1hO88427 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cacna1hO88427 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cacna1hO88427 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cacna1hO88427 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cacna1hO88427 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.94■■□□□ 1.1
Cacna1hO88427 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cacna1hO88427 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cacna1hO88427 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna1hO88427 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms