Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh16O88338 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh16O88338 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh16O88338 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.42■■□□□ 1.02
Cdh16O88338 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh16O88338 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh16O88338 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdh16O88338 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.4■■□□□ 1.02
Cdh16O88338 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Cdh16O88338 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Cdh16O88338 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.4■■□□□ 1.02
Cdh16O88338 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Cdh16O88338 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.39■■□□□ 1.02
Cdh16O88338 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdh16O88338 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdh16O88338 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh16O88338 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.39■■□□□ 1.01
Cdh16O88338 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.39■■□□□ 1.01
Cdh16O88338 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh16O88338 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh16O88338 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh16O88338 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh16O88338 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh16O88338 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh16O88338 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdh16O88338 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.38■■□□□ 1.01
Cdh16O88338 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdh16O88338 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh16O88338 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh16O88338 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh16O88338 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.37■■□□□ 1.01
Cdh16O88338 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cdh16O88338 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh16O88338 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.36■■□□□ 1.01
Cdh16O88338 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.36■■□□□ 1.01
Cdh16O88338 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh16O88338 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.36■■□□□ 1.01
Cdh16O88338 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.36■■□□□ 1.01
Cdh16O88338 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.36■■□□□ 1.01
Cdh16O88338 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.35■■□□□ 1.01
Cdh16O88338 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh16O88338 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh16O88338 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh16O88338 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh16O88338 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh16O88338 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
Cdh16O88338 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh16O88338 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh16O88338 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.34■■□□□ 1.01
Cdh16O88338 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh16O88338 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh16O88338 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.33■■□□□ 1
Cdh16O88338 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh16O88338 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Cdh16O88338 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh16O88338 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh16O88338 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh16O88338 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh16O88338 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.31■■□□□ 1
Cdh16O88338 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh16O88338 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.31■■□□□ 1
Cdh16O88338 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh16O88338 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cdh16O88338 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh16O88338 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh16O88338 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh16O88338 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh16O88338 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdh16O88338 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cdh16O88338 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh16O88338 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Cdh16O88338 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdh16O88338 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh16O88338 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh16O88338 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cdh16O88338 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh16O88338 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh16O88338 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.28■■□□□ 1
Cdh16O88338 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh16O88338 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh16O88338 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cdh16O88338 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh16O88338 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.28■■□□□ 1
Cdh16O88338 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh16O88338 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh16O88338 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh16O88338 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh16O88338 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh16O88338 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh16O88338 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh16O88338 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh16O88338 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cdh16O88338 Gm6821-201ENSMUST00000107540 542 ntBASIC21.26■□□□□ 0.99
Cdh16O88338 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.26■□□□□ 0.99
Cdh16O88338 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh16O88338 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh16O88338 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cdh16O88338 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh16O88338 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh16O88338 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms