Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.61■■□□□ 1.05
Slc1a6O35544 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc1a6O35544 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc1a6O35544 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a6O35544 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc1a6O35544 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a6O35544 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a6O35544 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a6O35544 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc1a6O35544 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Slc1a6O35544 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc1a6O35544 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc1a6O35544 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Slc1a6O35544 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc1a6O35544 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Slc1a6O35544 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc1a6O35544 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.58■■□□□ 1.05
Slc1a6O35544 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc1a6O35544 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc1a6O35544 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc1a6O35544 Gm9812-201ENSMUST00000061934 968 ntBASIC21.57■■□□□ 1.04
Slc1a6O35544 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc1a6O35544 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.56■■□□□ 1.04
Slc1a6O35544 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Slc1a6O35544 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc1a6O35544 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc1a6O35544 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.56■■□□□ 1.04
Slc1a6O35544 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc1a6O35544 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc1a6O35544 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.56■■□□□ 1.04
Slc1a6O35544 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slc1a6O35544 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.55■■□□□ 1.04
Slc1a6O35544 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc1a6O35544 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.55■■□□□ 1.04
Slc1a6O35544 Gm4799-201ENSMUST00000095396 657 ntBASIC21.55■■□□□ 1.04
Slc1a6O35544 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc1a6O35544 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc1a6O35544 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.54■■□□□ 1.04
Slc1a6O35544 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.54■■□□□ 1.04
Slc1a6O35544 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc1a6O35544 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc1a6O35544 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc1a6O35544 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.53■■□□□ 1.04
Slc1a6O35544 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Slc1a6O35544 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc1a6O35544 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc1a6O35544 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc1a6O35544 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Slc1a6O35544 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Slc1a6O35544 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc1a6O35544 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc1a6O35544 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
Slc1a6O35544 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Slc1a6O35544 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
Slc1a6O35544 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc1a6O35544 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc1a6O35544 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Slc1a6O35544 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc1a6O35544 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Slc1a6O35544 Gm6821-201ENSMUST00000107540 542 ntBASIC21.5■■□□□ 1.03
Slc1a6O35544 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.5■■□□□ 1.03
Slc1a6O35544 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.5■■□□□ 1.03
Slc1a6O35544 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc1a6O35544 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.5■■□□□ 1.03
Slc1a6O35544 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc1a6O35544 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc1a6O35544 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc1a6O35544 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.49■■□□□ 1.03
Slc1a6O35544 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.49■■□□□ 1.03
Slc1a6O35544 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc1a6O35544 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc1a6O35544 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Slc1a6O35544 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc1a6O35544 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Slc1a6O35544 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.48■■□□□ 1.03
Slc1a6O35544 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.48■■□□□ 1.03
Slc1a6O35544 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc1a6O35544 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc1a6O35544 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc1a6O35544 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc1a6O35544 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc1a6O35544 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
Slc1a6O35544 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc1a6O35544 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc1a6O35544 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Slc1a6O35544 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc1a6O35544 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc1a6O35544 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc1a6O35544 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc1a6O35544 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Slc1a6O35544 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc1a6O35544 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc1a6O35544 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms