Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx4O35137 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx4O35137 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx4O35137 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Alx4O35137 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Alx4O35137 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx4O35137 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
Alx4O35137 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.57■□□□□ 0.72
Alx4O35137 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx4O35137 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx4O35137 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx4O35137 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Alx4O35137 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.55■□□□□ 0.72
Alx4O35137 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx4O35137 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx4O35137 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
Alx4O35137 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.55■□□□□ 0.72
Alx4O35137 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx4O35137 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.55■□□□□ 0.72
Alx4O35137 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx4O35137 Gm6821-201ENSMUST00000107540 542 ntBASIC19.54■□□□□ 0.72
Alx4O35137 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx4O35137 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.54■□□□□ 0.72
Alx4O35137 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alx4O35137 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Alx4O35137 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Alx4O35137 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx4O35137 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx4O35137 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Alx4O35137 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx4O35137 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.52■□□□□ 0.72
Alx4O35137 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx4O35137 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx4O35137 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alx4O35137 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.52■□□□□ 0.72
Alx4O35137 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.52■□□□□ 0.72
Alx4O35137 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alx4O35137 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alx4O35137 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Alx4O35137 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Alx4O35137 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alx4O35137 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.5■□□□□ 0.71
Alx4O35137 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.5■□□□□ 0.71
Alx4O35137 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Alx4O35137 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.5■□□□□ 0.71
Alx4O35137 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alx4O35137 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.49■□□□□ 0.71
Alx4O35137 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.49■□□□□ 0.71
Alx4O35137 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Alx4O35137 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alx4O35137 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Alx4O35137 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Alx4O35137 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 Terc-201ENSMUST00000082862 423 ntBASIC19.48■□□□□ 0.71
Alx4O35137 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alx4O35137 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.47■□□□□ 0.71
Alx4O35137 Mir3960-201ENSMUST00000198213 73 ntBASIC19.47■□□□□ 0.71
Alx4O35137 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alx4O35137 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx4O35137 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx4O35137 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Alx4O35137 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx4O35137 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.46■□□□□ 0.71
Alx4O35137 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx4O35137 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alx4O35137 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Alx4O35137 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx4O35137 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.45■□□□□ 0.7
Alx4O35137 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Alx4O35137 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.45■□□□□ 0.7
Alx4O35137 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alx4O35137 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx4O35137 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alx4O35137 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Alx4O35137 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.44■□□□□ 0.7
Alx4O35137 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms