Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Atn1O35126 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atn1O35126 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atn1O35126 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.38■■□□□ 1.01
Atn1O35126 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atn1O35126 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atn1O35126 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Atn1O35126 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atn1O35126 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atn1O35126 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Atn1O35126 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.37■■□□□ 1.01
Atn1O35126 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Atn1O35126 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atn1O35126 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atn1O35126 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Atn1O35126 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.37■■□□□ 1.01
Atn1O35126 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atn1O35126 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atn1O35126 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atn1O35126 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atn1O35126 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Atn1O35126 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atn1O35126 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atn1O35126 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atn1O35126 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atn1O35126 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Atn1O35126 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atn1O35126 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.35■■□□□ 1.01
Atn1O35126 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atn1O35126 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.34■■□□□ 1.01
Atn1O35126 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atn1O35126 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atn1O35126 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atn1O35126 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atn1O35126 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atn1O35126 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atn1O35126 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.33■■□□□ 1
Atn1O35126 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atn1O35126 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Atn1O35126 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.32■■□□□ 1
Atn1O35126 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.32■■□□□ 1
Atn1O35126 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Atn1O35126 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Atn1O35126 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atn1O35126 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.31■■□□□ 1
Atn1O35126 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atn1O35126 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atn1O35126 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atn1O35126 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atn1O35126 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.29■■□□□ 1
Atn1O35126 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Atn1O35126 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.29■■□□□ 1
Atn1O35126 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.28■■□□□ 1
Atn1O35126 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.28■■□□□ 1
Atn1O35126 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Atn1O35126 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Atn1O35126 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atn1O35126 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atn1O35126 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.28■■□□□ 1
Atn1O35126 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atn1O35126 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atn1O35126 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atn1O35126 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atn1O35126 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atn1O35126 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.26■□□□□ 0.99
Atn1O35126 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atn1O35126 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.26■□□□□ 0.99
Atn1O35126 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Atn1O35126 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.26■□□□□ 0.99
Atn1O35126 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atn1O35126 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atn1O35126 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Atn1O35126 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Atn1O35126 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Atn1O35126 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atn1O35126 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Atn1O35126 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atn1O35126 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atn1O35126 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atn1O35126 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atn1O35126 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atn1O35126 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atn1O35126 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Atn1O35126 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atn1O35126 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.24■□□□□ 0.99
Atn1O35126 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Atn1O35126 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Atn1O35126 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.24■□□□□ 0.99
Atn1O35126 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atn1O35126 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atn1O35126 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atn1O35126 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atn1O35126 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atn1O35126 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.23■□□□□ 0.99
Atn1O35126 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atn1O35126 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atn1O35126 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Atn1O35126 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atn1O35126 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atn1O35126 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms