Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2b3O09039 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2b3O09039 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2b3O09039 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh2b3O09039 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2b3O09039 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2b3O09039 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2b3O09039 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sh2b3O09039 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2b3O09039 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sh2b3O09039 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.43■□□□□ 0.7
Sh2b3O09039 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Sh2b3O09039 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2b3O09039 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Sh2b3O09039 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2b3O09039 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2b3O09039 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2b3O09039 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2b3O09039 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2b3O09039 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2b3O09039 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sh2b3O09039 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh2b3O09039 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2b3O09039 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2b3O09039 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sh2b3O09039 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2b3O09039 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2b3O09039 Gm15546-201ENSMUST00000122095 826 ntBASIC19.38■□□□□ 0.69
Sh2b3O09039 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2b3O09039 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2b3O09039 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2b3O09039 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh2b3O09039 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.37■□□□□ 0.69
Sh2b3O09039 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2b3O09039 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sh2b3O09039 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sh2b3O09039 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.37■□□□□ 0.69
Sh2b3O09039 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2b3O09039 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2b3O09039 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2b3O09039 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh2b3O09039 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.35■□□□□ 0.69
Sh2b3O09039 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh2b3O09039 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2b3O09039 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2b3O09039 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2b3O09039 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sh2b3O09039 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.34■□□□□ 0.69
Sh2b3O09039 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh2b3O09039 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sh2b3O09039 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sh2b3O09039 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh2b3O09039 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.34■□□□□ 0.69
Sh2b3O09039 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2b3O09039 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2b3O09039 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2b3O09039 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2b3O09039 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2b3O09039 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.33■□□□□ 0.68
Sh2b3O09039 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Sh2b3O09039 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Sh2b3O09039 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2b3O09039 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sh2b3O09039 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.32■□□□□ 0.68
Sh2b3O09039 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh2b3O09039 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sh2b3O09039 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Sh2b3O09039 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2b3O09039 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2b3O09039 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2b3O09039 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sh2b3O09039 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2b3O09039 Gm22567-201ENSMUST00000175542 342 ntBASIC19.3■□□□□ 0.68
Sh2b3O09039 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.3■□□□□ 0.68
Sh2b3O09039 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.3■□□□□ 0.68
Sh2b3O09039 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2b3O09039 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2b3O09039 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2b3O09039 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2b3O09039 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2b3O09039 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2b3O09039 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2b3O09039 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2b3O09039 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2b3O09039 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh2b3O09039 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sh2b3O09039 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sh2b3O09039 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms