Protein–RNA interactions for Protein: O08859

Tnfaip6, Tumor necrosis factor-inducible gene 6 protein, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip6O08859 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip6O08859 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tnfaip6O08859 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Tnfaip6O08859 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip6O08859 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip6O08859 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfaip6O08859 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfaip6O08859 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfaip6O08859 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tnfaip6O08859 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.01■□□□□ 0.47
Tnfaip6O08859 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip6O08859 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnfaip6O08859 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.01■□□□□ 0.47
Tnfaip6O08859 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.01■□□□□ 0.47
Tnfaip6O08859 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip6O08859 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip6O08859 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip6O08859 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip6O08859 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18■□□□□ 0.47
Tnfaip6O08859 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18■□□□□ 0.47
Tnfaip6O08859 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip6O08859 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18■□□□□ 0.47
Tnfaip6O08859 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tnfaip6O08859 Gm27502-201ENSMUST00000183495 199 ntBASIC17.99■□□□□ 0.47
Tnfaip6O08859 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip6O08859 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tnfaip6O08859 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.98■□□□□ 0.47
Tnfaip6O08859 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip6O08859 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfaip6O08859 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfaip6O08859 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.96■□□□□ 0.47
Tnfaip6O08859 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfaip6O08859 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tnfaip6O08859 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip6O08859 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfaip6O08859 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Tnfaip6O08859 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfaip6O08859 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Gm14523-201ENSMUST00000117260 558 ntBASIC17.93■□□□□ 0.46
Tnfaip6O08859 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tnfaip6O08859 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfaip6O08859 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.91■□□□□ 0.46
Tnfaip6O08859 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.91■□□□□ 0.46
Tnfaip6O08859 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.91■□□□□ 0.46
Tnfaip6O08859 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Gm7332-201ENSMUST00000118351 454 ntBASIC17.91■□□□□ 0.46
Tnfaip6O08859 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfaip6O08859 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms