Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28043E0CXC2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.79■■□□□ 1.08
Gm28043E0CXC2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28043E0CXC2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28043E0CXC2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28043E0CXC2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28043E0CXC2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Gm28043E0CXC2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm28043E0CXC2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm28043E0CXC2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.77■■□□□ 1.08
Gm28043E0CXC2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.77■■□□□ 1.08
Gm28043E0CXC2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm28043E0CXC2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Gm28043E0CXC2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28043E0CXC2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Gm28043E0CXC2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28043E0CXC2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28043E0CXC2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28043E0CXC2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28043E0CXC2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28043E0CXC2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28043E0CXC2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28043E0CXC2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28043E0CXC2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.7■■□□□ 1.06
Gm28043E0CXC2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28043E0CXC2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28043E0CXC2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm28043E0CXC2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Gm28043E0CXC2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28043E0CXC2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28043E0CXC2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28043E0CXC2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm28043E0CXC2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28043E0CXC2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28043E0CXC2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28043E0CXC2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28043E0CXC2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28043E0CXC2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28043E0CXC2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28043E0CXC2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28043E0CXC2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28043E0CXC2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
Gm28043E0CXC2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28043E0CXC2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28043E0CXC2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.65■■□□□ 1.06
Gm28043E0CXC2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Gm28043E0CXC2 Terc-201ENSMUST00000082862 423 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms